Brasilonema octagenarum: DP113_06390
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Entry
DP113_06390 CDS
T10103
Name
(GenBank) RNA helicase
Organism
box Brasilonema octagenarum
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_cyano_M
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
nSTAND3
ATPase_2
Mito_fiss_reg
nSTAND_NTPase5
ATPase
Motif
Other DBs
NCBI-ProteinID:
QDL13943
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Position
complement(1470870..1473548)
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AA seq
892 aa
AA seq
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MNYPALSPELEPSSIFPFELDQFQKDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALS
RGKRVFYTTPLKALSNQKLRDFREKFGFDHVGLLTGDASINRDASILVMTTEIFRNMLYG
TPIGQIGISLVDVEAMVLDECHYMNDRQRGTVWEESIIYCPREIQLVALSATVANSDELT
DWLNQVHGPTDLIYSDHRPVPLEFHFGNIKGLFPLLNDDKTQINQRLLRKKKKGEKNKSK
ANVRAEAPSMIQVLGELHERDMLPAIYFIFSRRGCDKAVAEVGSDMWLVDQEEAQQLRWQ
IDEFLSRNPEAGRSGHVGPLYRGIAAHHAGILPAWKVLVEELFQQGLIKVVFATETLAAG
INMPARTTVISTLSKRTDSGHRLLNASEFLQMAGRAGRRGMDERGHVVTLQTPFEGAKEA
AYLATSQSDPLVSQFTPSYGMVLNLLQTHTLEEAKELVERSFGQYSANLHLRPQHEYITH
LQTELAQLQAQIAAIDEAELAVYEKLRQRLRVERLNLKMLQEQAQEARQQELGMMLDFAV
SGTLLSLKSKNFTMPAPITAVLVGKTLGSSQTCYLVCLGRDNRWYVATASDVIDLFAELP
RIDIPAELLPPPEMPLKRGQSLVGDEQTAIITQQIPEPSEAVFMPPEVLEQLRRVTAVQE
QLEAHPLHQSGDAVSVFKRRTQVVELEAEIELMQGQIQQQSQRHWEEFLNLIEILQQFQC
LENLVPTRLGQMAAAIRGENELWLGLALEGGELDNLDPHHLAAAIAALVTETPRPDSMVR
FDLSEAVAEALSKLRGIRRKIFQLQRRYNVALPIWLEFELIALVEQWALGMEWIELCENT
SLDEGDVVRILRRTLDLLSQIPHVPYLSQSLQRNAHRAMQLIDRFPVNEVGG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtgaattaccctgcgctgtctccagaacttgaaccaagttcgatatttccatttgaattg
gatcagttccaaaaggatgcaatcgcttccttgaatgccggacgttccgttgttgtatgt
gcgcccacaggttcgggcaaaacattggtgggggaatacgctatatatcgcgccctatcg
cgtggaaaaagagtattttataccactcccctaaaagcgctctccaatcagaaactacgt
gactttcgggaaaaattcggctttgaccatgttggactgttaactggagatgcctccatt
aaccgagatgcctcgattctggtgatgaccacagaaattttccggaatatgctctatggc
acacccatcgggcaaattggcatttcattagtagacgtagaggctatggtgctggatgag
tgccactacatgaatgatcgccaacggggaacagtttgggaagaatcgatcatctactgc
ccccgtgaaattcaactcgtagcgctctcagcaactgttgctaatagtgatgaactgacc
gactggttaaatcaagttcatggtccgactgacctcatatactccgatcatcgcccagtt
cctttggaatttcactttggtaacatcaaagggttattccccctactgaatgatgacaaa
acccaaattaaccagcgcctgctaagaaagaagaaaaaaggagagaaaaacaaaagcaaa
gctaatgtcagagctgaagcccccagcatgattcaagttctgggcgagctacacgaacga
gatatgctgccagcaatttacttcatcttcagtcgtcggggatgtgataaggcggtggcg
gaggtgggcagcgatatgtggttagtggatcaggaagaagcgcagcaattgcgctggcag
attgacgaatttttaagccgtaatccggaagctggacgttccggacacgttggaccgctt
taccgaggaatagccgcacaccatgctggaattttacctgcgtggaaagtccttgttgaa
gagctttttcagcaggggttaattaaagttgtctttgccaccgaaaccttggcagctgga
attaatatgccagcccggacaacggtgatttctactctttctaagcgtactgatagtgga
catcggctgttgaatgcctccgaatttctgcaaatggcaggtcgggcaggtcgccgggga
atggatgaacggggtcacgttgtgacgttacaaactccctttgagggagccaaagaagca
gcgtacttggcaacatcccaaagcgaccctctagtgagtcaatttacaccaagttacggc
atggtgctgaacttgctgcaaactcatactttggaagaagccaaggaattggtagaacgc
agctttgggcagtactcggcaaacttgcacctgcgaccgcaacacgaatacatcacccac
ttacaaacagaacttgctcaacttcaagcacaaatcgctgctattgacgaagcagaactg
gctgtttatgaaaaattgcggcaacgcttgcgagtagaacgcttaaacttgaaaatgctg
caagagcaagcgcaggaagcccgacaacaggaattggggatgatgttggactttgcagtg
tcgggaacactgttgagtctcaaaagtaaaaacttcacaatgcctgcgcccataacagca
gtgttagtagggaaaacactaggttcgagtcaaacttgttacttggtatgcttggggcga
gataaccgctggtatgtagcgacagcctctgatgttatagatttgtttgcagaactaccg
cgaattgacatacctgctgagttgctaccaccaccagaaatgccattgaaacggggacag
tcgcttgttggtgatgagcaaaccgcaatcataactcaacaaattcctgagccaagcgaa
gctgtatttatgcctccagaagtcctagaacaacttcgtcgcgtcactgctgtgcaagag
caattagaggctcatcccttacatcaatcaggcgacgctgtcagtgttttcaaacgcaga
acacaggttgttgaacttgaagctgaaattgaattaatgcagggacaaatacagcaacaa
tctcagcgtcattgggaagagtttctcaatcttattgagattttgcagcagtttcaatgt
ctggagaatctagttcccacaaggttaggacaaatggctgcagccattcgaggagaaaat
gagttgtggctgggcttagcacttgagggtggagaattggacaacttagatccacaccac
ttagcagcagcgatcgcagctttggtgacagaaaccccacgtccagatagcatggttcgc
tttgacttgagtgaagcagtggcagaagctttatcaaaattgcgagggattcgtcgcaag
atcttccaactgcaacgtcgttataatgtagccttaccaatatggttagagtttgagtta
atagcccttgtggagcagtgggcgcttggtatggagtggatagaactttgtgaaaatacg
agtttggatgaaggtgatgtggtgcgaattttacgtcgtacgttagatctattatcgcaa
attccccacgtaccctatttgtcacaatccttgcagcgcaatgcccatcgtgctatgcag
cttattgataggttcccagttaacgaggtagggggataa
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