Brasilonema octagenarum: DP113_06770
Help
Entry
DP113_06770 CDS
T10103
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
box Brasilonema octagenarum
Pathway
box03018
RNA degradation
Brite
Enzymes [BR:
box01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DP113_06770
Messenger RNA biogenesis [BR:
box03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DP113_06770
Ribosome biogenesis [BR:
box03009
]
Prokaryotic type
rRNA processing factors
DP113_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDL14005
LinkDB
All DBs
Position
1556448..1558565
Genome browser
AA seq
705 aa
AA seq
DB search
MPKQIIIAEQHQIAAVFSEDQIQELVVATGHHQIGDIYLGVVENVLPGIDAAFVNIGDPE
RNGFIHVTDLGPLRLRRTAAAITELLTPQQKVLVQVMKEPTGTKGPRLTGNITLPGRYVV
LMPYGRGVNLSRRIRSESERNRLRALAILIKPAGMGLLVRTEAEGKPEEAIIEDLELLQK
QWEAIQQEGQSTRPPALLNRDDDFIQRVLRDMYGADVNRIVVDSSTGLKRVKQYLQNWSG
GQTPQGVLIDHHRDRAPILEYFRINAAIKEALKPRVDLPSGGYIIIEPTEALTVIDVNSG
SFTRSATARETVLWTNCEAATEIARQLRLRNVAGVIVVDFIDMESRRDQLHVLEHFNKAL
KADKARPQIAQLTELGLVELTRKRQGQNIYELFGTVCSTCGGLGHIVHLPGETESRPLAA
PTELPDRFASSLPYKEPRLPVTRPTESRETLEGYGEPYESDNDLATLNLVNHPSYQEMTD
SRKRRTRRSTRIERLNGGNGKDEPRVGTNNPLAFLNEPDLEIDDEPELPTPSEVSSPTIS
KPSWGSDRVIERSHKVVTKVEPIKPVVEPPEIVTVEMSSQEQDVYAQMGVSPLEKLSREV
RNPKSVIINVTLPGHSPATPTESTSESPVSARVTAVVTPSLPTESIPETTSDVSGDVSGD
VSGDVSGDVSDLPVMTEDESEVTSSLSDKRRRRRRSSSVETDTEN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacaaattatcatcgcggaacagcatcaaattgctgcagtattttctgaagac
caaatacaagaactcgtagtggccacaggacatcaccaaatcggtgatatctacttagga
gtagtggagaatgtactacctgggatagatgcggcttttgttaatataggcgatccagag
cgaaatgggtttattcatgtcactgacttaggtcccctacgactcagacgtacagcagcg
gcgattacagaattattaacaccgcagcaaaaagtattagtgcaagtaatgaaagagcca
acaggtactaaaggaccaaggctcaccgggaacattaccttgccaggacgctacgttgta
ctgatgccatacggtcggggagtcaatttatcacgtcggattaggagtgaaagcgaacgt
aatcgtttgcgtgcgctagcaattttaattaaaccagcagggatgggtttgttagttcgt
accgaagccgaaggcaaaccagaagaagcgattattgaagatttagaattgctgcaaaag
caatgggaagcaattcagcaagaagggcaatcaacgcgtccgccagcgctcttaaatcgg
gatgatgatttcatccagcgcgtgctaagggatatgtacggggcagatgtaaacagaatt
gtggtagactccagtactggcttgaagcgagtgaaacagtacttgcaaaactggagtggt
ggacaaacaccgcaaggggtgttaatagatcatcaccgtgatcgcgcaccaattttagaa
tacttccgtattaatgctgcaattaaagaagctctcaaacccagagtagacttaccttct
ggaggctatatcattatcgagccgacagaagcattaacagtgatagatgtcaactctggt
tcattcacgcgatcggcaacagctagagaaactgttttatggacaaactgtgaagcagcc
acagaaattgctcgtcagctgcggttgcgaaatgttgcaggagtaattgtcgttgatttt
attgatatggaatcgcggcgtgatcaactgcatgttctagaacatttcaacaaagcactc
aaagcagacaaagctcgtccccagattgcccaactcactgagttaggtttagtagaactc
actcgcaaacgtcaaggtcaaaatatttacgaattgtttggtacagtttgttccacctgc
ggcggtttagggcacattgtccatttaccaggagaaactgaaagccgacccctcgccgca
ccaacagaattaccagaccgttttgcatcttccttgccctataaagaaccacgtctgcca
gtaactcgaccgactgaatcacgggaaaccttggaaggatatggggaaccatacgagagt
gacaatgatttggctactttgaatctagtcaatcatcccagctaccaagaaatgactgat
agcagaaagcgtcgtacccgccgtagtacgcgcatagaaaggttaaatgggggaaatggc
aaagatgagccacgggttgggactaataaccctctggcgtttttgaacgagccagacttg
gaaatagatgatgagccggaacttcccaccccatcagaggtctcttcacccactattagc
aaaccttcttgggggagtgacagagtcatcgaacgtagccataaagtggtgacaaaggta
gaaccaatcaagccagtggtagaaccaccggagattgtaactgtagaaatgtcgtctcag
gaacaggatgtctacgcccagatgggagtttctccgttggaaaaattgagtcgggaggtc
agaaatcccaaatctgttattatcaacgtcaccttgcctggacacagtcctgcaacacca
actgaatcaacctcagaatcacctgtctctgctagagtcaccgctgtagtcacacccagt
ctaccaaccgaatcaattccagaaacgacatctgatgtatcgggtgatgtatcgggtgat
gtctcaggtgatgtctcaggtgatgtctcggatcttcccgtaatgacagaagatgaaagt
gaagtaaccagcagtctaagtgataagcgccgccgtcgccgtcgttcttcctctgtggag
actgatactgaaaactaa
DBGET
integrated database retrieval system
