KEGG   Brasilonema octagenarum: DP113_09340
Entry
DP113_09340       CDS       T10103                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
box  Brasilonema octagenarum
Pathway
box03410  Base excision repair
box03430  Mismatch repair
box03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:box00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DP113_09340 (recJ)
   03430 Mismatch repair
    DP113_09340 (recJ)
   03440 Homologous recombination
    DP113_09340 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:box03400]
    DP113_09340 (recJ)
DNA repair and recombination proteins [BR:box03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DP113_09340 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DP113_09340 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DP113_09340 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: QDL14447
LinkDB
Position
2193163..2195490
AA seq 775 aa
MPEQQWILATTEQPPEWFIQAVKQYAPASSGHFAAQLLWQRGIRKNAQLAAFVNSQAYQA
ASPFEFGQEMHLAVERLQQARHAGEKVAIWGDFDADGITSTAVLWDGLGQFFAQNTQLVY
YIPNRLTESHGLNCQGIEKLAKEDFKLIVTCDTGSTNISEIIYAKQLGVDVIVTDHHTLP
VERPPVTAIINPRYLSQTHQLFHLSGVAVAYKLVEAFYQTLPNVGQQPLEDLLDLVAVGL
IADLVQLSGDCRYLAQLGIGRLQDDFKKTPDKRRRPGVGRLLELCQKSGDRPTDISFGLG
PRINAVSRIQGDASFCVELLTSRDQKRVNELAEVTELANSRRKSLQKDVAGQVALKLSKM
DLSTTSVIVLEDPQWAVGVLGLVAGQVAQETGRPTILLSTEVAGEQGSNLSPVLLARGSA
RSINSVDLYQLVKDQAHLLHRFGGHPYAAGLSLRVENIPLFTQAINQRLRQSLGGANLTP
NVQADLAVTVADLGKDLFLELKLLEPCGMGNPVPKLLIQNCWFENTWHRNQQDSQGKKVQ
YIKAEFDIRDDSTRNPFPGVWWGHYKDELPPGRCDCIAELDYNTFKKRYEIRLIAVRSRT
NSALSTQHAKLILDLRNLPLEKELALTTDHSGLILQECPTSWDDLRAHLRRSLHNQQPLV
LAWLKPNSQPPEQTWLTLVGIAKYLGRTNQPVTRIQLLEKLGINDQTLLFGLRSLRYLGF
NISRQDRMLVFTQHSTIETTQAEAAVEKFLAAVREEQFQRQYFAEVPLSVIEAIA
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgccagaacaacagtggattcttgcgacaactgaacaaccccccgaatggtttatccaa
gcggtgaagcaatatgcacctgcatcgagtggacattttgccgcacagttgttgtggcaa
cgaggaatacgaaagaacgcacaattagcagcttttgtcaattcacaagcttatcaagcc
gcgagtccatttgagtttgggcaagagatgcatctggcggtggaacggttgcaacaagca
cgacatgctggggaaaaagttgctatttggggagactttgacgcggacggtatcacgtct
acggctgttctgtgggatggtttgggacaatttttcgctcaaaatacgcagcttgtttat
tacattcctaatcgtttaacggaatctcacggtttgaactgccaaggaattgagaagctt
gcaaaagaagactttaaattgattgtcacttgtgacactggcagtacaaatattagtgaa
attatttatgctaagcagttaggtgtagatgttatagtcacagaccatcacactttacct
gtggaacgtccccctgtgacggcaattattaaccctcgctatttgagccaaacacatcaa
ctgtttcatctttctggggtggcggtggcttacaagttggtggaagctttttatcaaact
ctgccaaatgtcgggcaacaaccgctagaagatttgttggatttagttgcagttggactg
attgctgatttggtgcagttgagtggagattgtcgctacttggcacagttgggaattggg
cgactgcaagacgattttaagaaaacaccagataagaggcggcgtccaggtgtcgggcgg
ctgttggaattatgccagaaaagtggcgatcgccccacagatatctcctttggtttaggt
ccccgaattaacgctgtcagccgcattcaaggcgatgcttctttttgcgtggaattactc
acaagccgcgatcaaaagcgtgtgaatgaacttgcagaagtcacagaattagcgaacagt
cgtcgcaagtctttgcagaaagatgttgctgggcaagtcgcgctgaagctttccaaaatg
gacttatcaaccaccagcgttattgtcttggaagatcctcaatgggctgttggcgttttg
gggttagttgcaggacaagtcgcacaggagacaggacgcccgacgattcttttgagtacg
gaggtagccggggagcaggggagcaatctttctcctgttcttctggcgcggggttcggcg
cgttctattaattcggttgatttataccaattggtaaaagaccaagcacatttgttgcat
cgatttggcggacatccttatgcagcagggttaagtcttcgagtagagaacataccttta
tttacacaagcaattaaccagaggttacgtcaatcgttgggaggagcaaacctaacacca
aatgtacaagcggacttggctgtaacggtagcagatttggggaaagatttatttttggaa
ctgaagctgctagaaccctgtggaatgggaaacccagttccaaaacttttgattcaaaac
tgttggtttgaaaatacttggcatcgcaatcagcaagattctcagggaaaaaaggtacag
tacataaaagccgagtttgatattcgagatgactccacgagaaatccttttcctggcgtg
tggtggggacactataaagatgaattacctcccggacgatgtgactgtatcgcggaactg
gactacaacacctttaaaaaacgctatgaaatccgactgatagctgttcgttcccgcaca
aactcagcattgagtacccagcatgcgaaactcattttagatttacgcaacttaccatta
gaaaaagagttagcactaaccactgatcattcaggactcatactgcaagagtgtccgaca
agttgggacgatttacgtgcgcatttgaggcgatcgctccacaaccaacaacccctcgtg
cttgcttggttaaaaccaaattcccaaccaccagaacaaacctggcttacgcttgtagga
attgccaaatatctgggccgcacaaatcaacctgttacccgtatccagttattagaaaaa
cttggtattaacgaccaaaccttactttttgggttaagaagtttgagatacttaggtttt
aatatctcacgtcaagaccgtatgttggttttcactcagcactctaccattgaaacaact
caagcagaagctgcggtggaaaaatttttagctgccgttcgggaagaacaatttcagcga
cagtattttgcggaagttccgttatctgtaattgaggcgatcgcataa

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