Brasilonema octagenarum: DP113_12245
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Entry
DP113_12245 CDS
T10103
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
box Brasilonema octagenarum
Brite
KEGG Orthology (KO) [BR:
box00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DP113_12245 (ltrA)
Enzymes [BR:
box01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
DP113_12245 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
HNH_5
Intron_maturas2
Motif
Other DBs
NCBI-ProteinID:
QDL14925
LinkDB
All DBs
Position
2849891..2851546
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AA seq
551 aa
AA seq
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MSYLGTTNGLRKPLEDWSQINWRKINKAVRNLRQRIFLARKLGNWRKLRNLQKLMQRSYA
NLLLSVRKITQTNKGKATAGIDKEIINTPKQRVKLVNNWSGGNQDPTKRVMIPKANGKKR
PLGIPTVRDRIEQAIIVNSLEPEWEAVFEPNSYGFRCGRSCHDAIAQNWIRLNASPNARN
NWVLEADIQGFFDNIAHESILRQLGNFPNKNLIKGWLKAGFIFEGIYSPTETGTPQGGVC
SPLLANIGLHGLETFIKSTNPKLGVVRYADDFIVTARDKGSLENAQIQIQQWLSERGLNL
STEKTFITSMADGFDFLGFNHRHYNGKLLIKPSKKKVLDFCKRIGQEIKAMNGCEQEVVI
KRLNPILRGFANYYRGVVSKETFEYVKSRIWQYLWRWAKRRHPNKNTKWVRKRYFQTRNR
KKWTFATSTSDRRGKQKDLILYPIAYTPIERHVKVKGEASPDDPSLKEYWEKRHQKYGKS
YWEKNSRNYKIAQNQDWKCTCGEPLFNGEEIETHHIVPVAQGGLDDVKNLQHLHKACHKQ
VHTKSKSTRLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctcggtacaacaaacggactaagaaaaccactagaagattggagccaaatc
aactggcgaaaaatcaacaaagcggttaggaatctgcgtcaaagaatctttctcgcgaga
aaacttggtaactggcggaagttgagaaacctccaaaagttaatgcaaagaagctacgcc
aacctattactctctgttcggaaaatcactcagaccaataagggtaaagcaacggcagga
attgacaaagaaataatcaataccccaaagcagcgagtgaagctggtaaacaactggagt
ggaggaaatcaagatcctacaaaacgggtaatgatccccaaagccaacggtaagaaacga
ccgctcggaatcccaaccgtgcgcgacagaatcgaacaggcaataatagtcaattcacta
gaacccgaatgggaagccgtatttgaaccaaactcctatggattcaggtgcggtagaagc
tgtcatgatgccatagcacaaaattggataagattaaatgcaagtccaaatgctagaaat
aactgggttttagaagctgatattcaaggattcttcgacaatattgcccatgaatctatc
cttagacaactaggtaatttcccaaacaaaaacctaatcaaaggatggttaaaagctgga
tttatctttgaagggatatacagcccgacagaaacgggtacaccacaaggaggggtttgc
tccccgctcctagccaatatcggattgcatggattagaaacctttataaaatccaccaat
ccaaaacttggagtggttaggtacgctgatgattttatagtcacagctagagacaaagga
agcctcgaaaatgcccaaatccagattcagcaatggctgtcagaaagaggtttgaatctc
agtacggagaaaacgttcataacgtcaatggcagatggttttgacttcctcggcttcaat
caccgccattataatggcaaactgcttatcaaaccctcgaaaaagaaagtcttagacttt
tgtaaacgaatcggtcaagaaataaaagcaatgaacggatgtgaacaagaggtagtcatc
aaaagactgaacccaattctccgaggttttgctaattattacagaggtgtggttagtaaa
gaaacctttgaatatgtcaaaagtagaatatggcaatacctctggcgttgggctaaacgt
cgccatcccaacaagaacacaaaatgggtacggaaacgttactttcagaccagaaatcgc
aagaaatggacgttcgctacatctactagcgaccgccgaggcaaacaaaaggatttaatc
ctatacccgatagcgtacacgcccatcgaacgccatgtaaaggtcaagggggaagcatca
ccggatgacccctcactcaaagaatattgggaaaaacgccaccaaaaatatggtaagagc
tactgggagaaaaactctcggaattataaaatcgctcaaaaccaagactggaaatgtacc
tgtggtgaaccattattcaatggagaggaaatagaaacccatcacatcgtacctgttgct
caaggtggacttgatgacgtaaaaaaccttcagcatctacacaaagcgtgtcataagcag
gtacacacaaaatccaagtcaactcgcttgaagtaa
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