Brasilonema octagenarum: DP113_12965
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Entry
DP113_12965 CDS
T10103
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
box Brasilonema octagenarum
Brite
KEGG Orthology (KO) [BR:
box00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
box03016
]
DP113_12965
Enzymes [BR:
box01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DP113_12965
Transfer RNA biogenesis [BR:
box03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DP113_12965
Prokaryotic type
DP113_12965
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QDL18609
LinkDB
All DBs
Position
complement(3029002..3029967)
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AA seq
321 aa
AA seq
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MEITFLGTSSGVPTRSRNVSSVALRLPQRAQMWLFDCGEGTQHQILRSDLRVSQLSRIFI
THMHGDHIFGLMGLLASCGLAGNVQRVDIYGPPGLNDYLQAASRYSHTHFSYPVKVHAVR
PGVIYEDDEFIVSCGFLHHRVTSFGYRVLEKDRPGRFDVEKAKTLEIPPGRIYGQLKRGE
VVTLADGRVIDGKELCGPTEIGRKIAYCTDTLYCDGAVELAQDADVLIHEATFAHQDAEM
AFQRLHSTTTMAAQTALAAGVNRLIMTHFSPRYAPGNEIELKDLLEEARAIFPNTNMAYD
FMTYEVPRRRDKELKKAEAMA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtggagataacatttctagggacgagttccggtgtacctacgcgatcgcgcaatgtttcc
agtgtcgccctgaggttaccacaacgtgctcagatgtggttattcgactgtggtgaagga
actcagcatcaaattttgcggagtgatcttagagtcagccaactctcccgaatttttatc
acccatatgcacggcgatcatatttttggcttaatgggtcttctcgccagttgtggctta
gcaggaaatgtacaacgcgttgatatctatggcccacccggattaaatgactacctacaa
gccgcctcgcgctactcccacacccacttttcttatccggtcaaagttcatgccgtacgt
ccaggcgtgatttacgaagatgatgaattcattgtaagctgtggttttttgcatcatcgc
gttactagttttggctaccgtgttttagagaaagaccgaccaggacgttttgatgtagag
aaagccaaaacattggaaattccacccggtcgcatttacggtcaactcaaacgtggtgaa
gtcgtaacccttgcagatggacgggtgattgacggtaaagaactgtgtggaccgacagaa
attggacgcaaaattgcctattgtacagatacactttattgtgacggtgcagtcgaattg
gcacaggatgcagatgtgttaattcatgaggcgacattcgcccatcaagatgcagaaatg
gcttttcaacggttacattccacaaccacaatggcagcacaaactgctttagctgctggg
gtaaatcgactcatcatgacacattttagtcctcggtatgcccccggaaatgaaatagag
ttaaaagatttacttgaggaagctcgtgctatttttcccaatactaatatggcatatgat
tttatgacttatgaagtacctagacggcgggataaagaattaaaaaaggcggaggctatg
gcttaa
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