Brasilonema octagenarum: DP113_18960
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Entry
DP113_18960 CDS
T10103
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
box Brasilonema octagenarum
Pathway
box02010
ABC transporters
box03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
box00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DP113_18960
03070 Bacterial secretion system
DP113_18960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
box02000
]
DP113_18960
02044 Secretion system [BR:
box02044
]
DP113_18960
Transporters [BR:
box02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DP113_18960
Secretion system [BR:
box02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DP113_18960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
DUF3335
Peptidase_C39_2
AAA_22
NB-ARC
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
DUF87
RecA_C
AAA_30
Zeta_toxin
NACHT
Motif
Other DBs
NCBI-ProteinID:
QDL16065
LinkDB
All DBs
Position
complement(4472123..4475182)
Genome browser
AA seq
1019 aa
AA seq
DB search
MSSGFSQEQLSQQLMTFLGEKLSPKEVMNCLKEVEVVEPPVAKLFWQSTDSKPGVYIVLA
GKVRLLDSSLNLISTLAAGSSFGEVTLFPEEGFIPYAARASYNLKLCYISADALQILMEK
YPKIRDRLLRNAELWDLQLLYQNQHPNTSVNNIFQALSLFERLSFNKFQEIDVAPDTKLW
LLHRGKLQHSDGSCLTPGKIYTVPQQGSWQATQPTILYSLSNSDWLAAVQHLPQLTELIA
SDSKQITTEENEAPHTSFPQRRTNSRKVIPFPSQAAPPKQKRQRRVYFPSPQVKAGHLWA
HLTKRYPFFEQQSASDCGAACLVMMSRYWGKRFSINILRDLANVRRTGASLQGLAVAAES
IGFATRPVKASLDKLAQQPLPAIAHWEGKHYIVVYEITPKQVIVGDPAIGQRTLTYAEFK
AGWTGYALLVQPTAELKESQEASTPFWQLWELVKPHWQVLLEVFITSVFIQVFGLVTPLF
TQLLLDRVIVQGSTLTLTAIGLGLLIFGLFRVAMNGLRQYLLDHTANRIGTALMVGFIKH
TFRLPLAFFESRYVGDIVSRVQENQKIQRFLTGEALSIILDLLTVFIYVGLMFWYSWQMA
LLVLLIVPPFFILALVATPFFRRINREVFNALANENSYLIQALTGIRSIRSMAIEQTVRW
HWEELLNNLIKKMFGGQVIANQLQVLSSTIESVANTALLWFGAWLVIHNQLTIGQLVAFN
MLLGNIIHPFQRLTVLWNQLQEVMVSTERINDVLEAEPEEDLQHQPRQSLPRLRGYIRFR
DVTFRYHSESDINVLENLSFEIQPEQTVAVVGRSGSGKTTLSKLILGLYTPTNGKVLIDG
HDVTTLQMRSLRQQIGVVDQETFLFGGTIRENISIAHPEATLEEITEAANLAGASEFIQQ
LPMGYETQIGEGGGMLSGGQRQRLAIARALLGNPRLLIFDEATSHLDAESERIIQNNLKT
ILQGRTSLIIAHRLSTIRNADLILVLDQGVLVESGTHKELIAKKGHYYYLNQQQLAQVG
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagggttttcccaagaacaactgagtcaacaactcatgactttcttaggagag
aagctttcaccaaaggaagtgatgaattgtctaaaagaagtggaagttgtcgaaccaccc
gtagcaaagttgttttggcaatcaacagactctaagccgggtgtttatatagttcttgcg
ggtaaagtgagactgctggatagttctcttaacttaatctccactcttgcagcaggatca
tcatttggtgaggtgactctgtttccagaagaaggctttattccttacgcggctagagct
tcatataacttaaaactctgttatatcagcgcagatgcattgcagattttgatggagaaa
taccccaaaatccgcgatcgcctgttgagaaacgcagaactttgggatttgcagttgttg
tatcaaaatcaacaccccaatacatctgtcaataatatatttcaagccttatccttgttt
gaaaggctttcattcaataaatttcaagaaattgacgtagctccagatactaagttatgg
ctactacaccgaggcaaactacagcattctgacggtagttgtttgactccaggcaaaatc
tatactgttccacaacagggtagttggcaggcgactcaaccaacaattctgtacagtctg
tccaattctgattggcttgcagcagtgcaacacttgccccaattaacagagttgattgct
tctgactctaaacaaatcacaactgaggaaaacgaagcgcctcacacctcatttccacaa
agacgtaccaatagcaggaaagtcattccatttccctcgcaagccgcccccccaaaacaa
aagcgacagcgacgtgtctacttccctagccctcaggtaaaagcaggacatctatgggca
cacctgacgaaacgctatcccttttttgaacaacaaagtgcctcagactgtggtgcagcg
tgccttgtgatgatgagtcgctattggggtaagcgctttagcatcaatatattgcgggat
ttagctaacgtcaggcgcactggggcatctctacaaggtttagcagtagcagcagaaagc
atcggttttgcgactcgtccagtcaaagccagcctggacaaattggcacaacaaccctta
ccagcgatcgcccactgggaagggaagcattacatcgttgtctacgaaatcactcctaaa
caggtaattgtcggcgatcctgctatcggtcaacgcactctcacttatgctgagtttaaa
gcagggtggactggttatgccttattagtgcaaccgacagcagaactcaaagaaagccaa
gaagcgagtacaccattctggcaattgtgggagttagtcaaaccacattggcaagtcttg
ctggaagtcttcatcacttcggtatttatccaggtgtttggactagtcacgcctctgttc
acccagttactgttagacagagtgattgtccagggaagtaccctcaccttaactgccatt
gggttagggttgctgatttttggtttgttccgcgtcgccatgaacggactgcgacaatac
ctgctagatcatacagcgaaccggattggaacagccctgatggtaggttttataaaacat
accttccgccttcccctagccttctttgagtcgcgttacgtcggcgatattgtttctcgc
gttcaagaaaaccaaaaaattcagcgtttcctgactggcgaagcactctcaatcattctt
gatttactgacggtgtttatctatgtgggtttgatgttttggtatagctggcagatggca
ttgttagtgctgttgattgtgccgccattttttattctggcgctggttgctacacctttt
tttcgccgcatcaaccgtgaagtttttaatgccttagctaacgagaacagttatttaatt
caagccctcacaggaattcgctcgattcgttcaatggcaattgaacaaacggtgcgctgg
cattgggaagaactgctaaataatttgatcaaaaaaatgtttggcggacaagtcattgct
aaccaactgcaagttctcagttctaccatcgaatcagtggcaaatacagcattattatgg
tttggagcatggctggtaattcacaaccaactgacaattgggcaacttgtagccttcaat
atgttgttgggtaacatcattcatcctttccaacgcctaacagtactgtggaatcaatta
caagaggtgatggtttccaccgaacggattaatgatgttctagaagcggaaccagaagaa
gacttacaacatcaaccacgccaatctttgccaagactgcgaggttacattcgctttcgc
gatgtgactttccgctatcactcagaaagtgatattaacgtactggaaaacctcagtttt
gaaattcagcctgagcaaactgtagcggttgtagggcgtagcggttctgggaaaacaact
ctttccaagctgattttgggtttatataccccgacaaatggcaaagtattgattgatgga
catgatgtgacgactcttcagatgcgatcgctacgacaacaaattggtgttgtcgatcaa
gaaacctttttgtttggtggtacgattcgggaaaacattagcatcgctcacccagaagcc
actttagaagagattacagaagcagcgaatcttgcaggtgcttccgaatttattcagcaa
ttaccaatgggttacgaaacccaaatcggtgaaggcggcggaatgctttctggtggacaa
cgccaacgtctagcaattgctcgcgctttactaggtaatccccggttgttaattttcgat
gaggcaaccagtcacctcgatgcggaatcagaacggattattcaaaacaatttgaaaaca
attctccaaggacgtaccagcttgattattgcccatcgactttctacgattcgcaatgct
gacttgattctggtgttagatcaaggtgtgttggtggaaagcggtactcacaaggaatta
atcgccaaaaaaggtcattactactacctcaatcaacaacaactcgctcaagtaggctaa
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