Brasilonema octagenarum: DP113_22940
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Entry
DP113_22940 CDS
T10103
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
box Brasilonema octagenarum
Pathway
box02010
ABC transporters
box03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
box00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DP113_22940
03070 Bacterial secretion system
DP113_22940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
box02000
]
DP113_22940
02044 Secretion system [BR:
box02044
]
DP113_22940
Transporters [BR:
box02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DP113_22940
Secretion system [BR:
box02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DP113_22940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
Peptidase_C39
SMC_N
AAA_22
AAA_21
AAA_23
AAA_16
ABC_ATPase
AAA_29
SbcC_Walker_B
AAA_30
RsgA_GTPase
DUF87
Motif
Other DBs
NCBI-ProteinID:
QDL16734
LinkDB
All DBs
Position
complement(5427600..5430584)
Genome browser
AA seq
994 aa
AA seq
DB search
MTYTASIQEFISELFPFNQLPTRELAKLVPKFEMLRYHMGQSVLVREQMPSQIFIIYQGQ
ARLLGYDPNAQMPETLQLVQKGEILGWTSLIRGIPCETVIASTETICLTLSATEFLALLS
YSPAISICFENRCTAVEVFELLSTELAKRADSETVLASYGATDIKELTLKVLDEAVVCTF
LEETIPLDHLDPQLVWFVSGGILKDFPVGTRLQLNDVMTYLEVQTFGYVRLVGLPRATLS
ASASISRTKDSLRIDSLLQQVPLAPEHPYRLEKPSDTQSQPKYPHVHGRGPLKATLACFQ
MLSQHLNIPFRRDVIDQILNNQISRTQTLSLQLCGAVCELIGLNTQMINVSAKAITKLEA
PAMIRWQDTFAILYEISEKKLVLGVPEVGIVQQDPDHFVENWGQEGQVLLLKVAKYTPRK
RFSLSWFVPSLIKYRKVLLEVLIASFFVQVFGLANPLIIQIIIDKVIIQNGFETLNVLGV
LLLIMAVFEGLLTSVRTYLFVDTTNRIDLTLGSEIIDRLFRLPLRYFERRPVGELATRAS
ELENIRSFMTGTALTVVLDAVFSTIYILVMVVYSWMLTLVALATVPLFAFMTILFSSIMR
RQLRFKAERYSETQSYLVEALSGIQTVKAQNIELRSRWRWQEYYSNYVTAGFQTVVTSTA
ASVTSNFLNQVSSLLVLWVGAYLVLKGQLTLGQLIAFRIISGYVTAPLLRLTQLWQNFQQ
TGLSLERLADILDTPSEVDEDSQNIPLPAIDGTVKFENVCFRFTPTSPLQLNNINLDFPS
GKFVGIVGQSGSGKSTLMKLLPRLYDLESGRIFIDGYDISKIELYSLRRQIGMVLQDSLL
FDGTIQENIALTNPDATTDEIMTASKVAAAHDFIMSLPNGYNTRVGERGSSLSGGQRQRI
AIARTVLQNPRLLILDEATSALDYQSERQVCDNLAEAFRRRTVFFITHRLSTIKNADIIL
LLEKGLVAEQGTHNELMAQKGRYYCLYQQQEAQL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgacttatactgcttccatacaagagttcatctctgaattatttcccttcaatcaactg
ccaacacgagaactggcaaaattagttccaaagtttgagatgttacgctaccacatgggt
cagagcgttttggtgcgggaacaaatgccttctcaaatatttatcatttatcaagggcaa
gcccgcttgctgggttatgacccgaatgctcagatgcctgaaacgctgcaattagttcaa
aaaggagaaatcctgggttggactagtttaattagagggattccatgcgaaacagtcata
gcctctacagaaaccatttgtctgactctaagcgccacagagtttttagcgttgctgagt
tattctcctgctatttctatttgctttgaaaatcgctgtactgcggttgaagtttttgaa
ctactgagtactgagttagcaaagcgagctgatagtgaaactgttttggcttcatatggt
gcaacagatatcaaagaactgaccctcaaagttttagacgaagcagttgtctgcacgttc
ctagaagagacaatacctttggatcacctagatcctcaattggtgtggtttgtcagtggt
gggatacttaaagattttcctgtgggaacccgcttacaactaaacgatgtcatgacatat
ctagaggtacaaacttttggttatgttcgcttagtcggtttgcctcgggcaaccctttct
gcctctgcatctatatctagaaccaaagattccttaaggatagactctttactacaacaa
gtaccattagcaccagagcatccttataggttagaaaaaccatcagatactcaatcacag
ccaaaatatcctcatgttcatggtagaggtcctctaaaggcgactttagcttgcttccaa
atgctgagccagcatttaaatataccctttcgccgagatgtgattgatcaaatcctcaac
aaccagatttcgcgcactcaaactctttcactacagctttgcggtgctgtttgtgaactg
attgggttaaatactcaaatgataaacgtgtcagcaaaagcaatcacaaaactggaagct
ccagctatgattcgctggcaagatactttcgctatcctttatgaaattagcgagaaaaag
ctagtcctgggtgtaccagaagttgggattgtccagcaagatcctgaccattttgttgaa
aactggggtcaagaaggtcaggtattgctgctgaaagttgccaagtatactcctagaaag
cgatttagtttaagttggtttgtcccttctctaatcaaatatcgcaaagttctcttggaa
gttctgattgcttctttttttgtccaagtgtttggtctggctaatcccttaatcatccag
attattattgacaaagtgattattcagaacggctttgaaaccctgaatgtattgggggtt
ttgctcttaatcatggctgtttttgaaggacttttaacgagtgtccgcacctatcttttt
gttgatacgactaaccggattgacttgactttaggctcagaaattattgaccgtttgttt
cgtttacccttgcgctattttgaacgacgtcctgtgggggagttagccactcgcgccagt
gaactggaaaatattcggtcttttatgacgggtactgctttaacagtggtgttggacgca
gttttttcgacaatctacatcctggtgatggtggtttacagttggatgttgactcttgtg
gctttggcgactgtacccttgtttgcttttatgacgatacttttttcctcgatcatgcgc
cgccaactgcgttttaaggctgaacgttactctgaaactcaatcttatttagtcgaggcg
ctgtcaggtattcaaacagtcaaagcccaaaatattgaattgcgatcgcgctggcgctgg
caagaatattacagtaattatgtcaccgctggattccaaactgttgttacttccacggct
gctagtgtcaccagcaattttcttaaccaagtctcttccttacttgtgttatgggtagga
gcgtatttagtcctcaaaggacaactcaccttaggacaactgattgcctttcggattatt
tctggctacgttaccgctcctttattacgattaacccaattgtggcagaactttcaacaa
acggggctttctctagaacgccttgcagatatcttggatactccctcagaagttgatgaa
gacagtcaaaacattcctctacctgctattgatggtactgtcaagtttgaaaacgtctgc
tttcgcttcacaccaacttctccacttcagttgaataatattaacctggatttcccaagc
ggaaaatttgtcggtattgtcggacaaagtggttctggtaaaagcactttgatgaaactt
ttaccacgactgtatgacttagagtctggcagaattttcatcgatggctacgacatctcc
aaaatagaactttattccctgcgccgtcagattggtatggtgcttcaagactcacttttg
tttgacggaaccatacaggaaaatattgcgctgacaaatcctgacgccacaactgatgaa
attatgacagcaagcaaagttgctgcagctcatgactttattatgtctttgcccaatggc
tataacaccagagtcggagagagaggctcatccttatctggaggacagcgacagcgtatt
gctattgctcgtacagtcttacaaaacccccgcttgttgattcttgatgaagcaaccagt
gctctagattatcaatcggaacggcaagtttgtgacaacttggcggaagcatttagacga
cgaacagtgttttttattactcatcgtttaagtacaatcaagaacgctgacatcattttg
ctactcgaaaaagggttagttgcagaacagggaacccacaatgaattgatggcacaaaaa
ggacgttactactgcctttatcaacaacaagaagcacagctttaa
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