Brasilonema octagenarum: DP113_23230
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Entry
DP113_23230 CDS
T10103
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
box Brasilonema octagenarum
Brite
KEGG Orthology (KO) [BR:
box00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
DP113_23230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
HHH_9
Tex_central_region
S1
YqgF
S1_RRP5
HHH_7
OB_PDCD11
T2SSK
OB_RRP5_4th
HHH
SpoVAE
HHH_6
DUF7645
Motif
Other DBs
NCBI-ProteinID:
QDL16781
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Position
5495548..5497707
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AA seq
719 aa
AA seq
DB search
MLNIPQLLATELNLKPYQVQNALELLTEGATIPFIARYRKERTSEMNEVQLRELSDKYNY
LTELEERKSVILNSIAEQGKLTDELKQKIESCLLKTELEDLYLPYRPKRRTRATIAREKG
LEALAEFIKSLNNKNAVSASLDTEAAKYISEEKGVKTAEDALKGASDILAEEVAEKAELR
AYLRGYLLEEGVFVSRIKKDHPEGTTKFEMYRNYQMRVRNIAPHNMLALCRGEAEEVLSF
EISFDEDVVLSYLESKEIKTKVRAIRDFYQGMLKDAFNRLMKTSLISEVVAEKKTYADVE
SIKTFETNLRELLLSAPAGMKPTLAIDPGFRTGCKVAILDQTGKFLEYQAIFPHQAAEQR
LKAAQTLKNLISKYKVELIAIGNGTASRETDEFVLEVLQTMEQKPVKVMVNESGASIYSA
SKVALEEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDE
TVESCVNYVGVDLNTASKELLTSVSGITSSVANNIVAYRNQHGVFKNRRQLLKVAKLGPK
AFEQAAGFLRIRQSENPLDNTAVHPESYSLVEAIASDLNLPLTQITQIAEKLKKANLKKY
VTDTVGEPTLRDILSELEKPGRDPRAEFKYATFKEGIKEISDLKEGMELEGIVTNVANFG
AFVDIGVHQDGLVHISQLADRFVDDPKKIVKVGQVVKVRVLEINQKLKRISLSMKSIKQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatattcctcaattactagcaacagaactcaaccttaaaccctatcaggtgcaa
aacgccctagaacttttgacagagggtgcaacaattccctttattgcacgatatcgcaaa
gagcggacgagcgagatgaatgaagttcagttgcgcgaactgagcgataagtacaattac
ttaacagaattagaagaaaggaaatcggtgattttgaattccatagccgaacaagggaaa
ctcaccgacgaactcaaacaaaaaatcgaatcctgtttactcaaaactgaacttgaggat
ttatatctcccctatcgtcccaaacgccgtactcgcgccactatcgccagagagaaagga
ctcgaagcgctggcggagttcatcaaatcgctgaacaacaaaaatgctgtttcggcgtcg
ctggatacggaagcggcaaagtatatttctgaggaaaaaggagttaagacagcagaagat
gcactgaagggtgcttctgacatcttagcggaagaagtcgcggaaaaagctgagttgcga
gcatacctccggggctacttgctggaagaaggagtgtttgtctcccgtatcaaaaaagat
catcctgaaggtacaaccaagtttgagatgtaccgtaattatcaaatgagggtgagaaat
attgcgcctcacaatatgctggcgttgtgtcgcggtgaagcagaggaggtgttgtctttt
gaaatttcctttgatgaagatgtggtgctttcttatttggagtcaaaggaaattaagacg
aaagtccgcgccatccgcgacttttatcaagggatgcttaaagacgcattcaaccgcttg
atgaaaacttccttgataagtgaagtcgttgcggaaaagaaaacctacgctgatgttgag
tctatcaaaacttttgaaacgaatttgcgggagttgctgctgtctgcgccagcagggatg
aaaccaacgctggcgattgatcctggttttcggactggatgcaaagttgctatactcgac
caaacagggaaatttttggaatatcaagcgatatttccacatcaagcagctgaacaacgt
ttgaaagctgcacaaactctcaaaaatttgatttcaaaatataaagttgagttaattgcc
attggtaatggtacagcttcccgggagacagacgaatttgttttggaagtgctgcaaacg
atggaacaaaaaccagtcaaggtgatggtgaatgagtcgggtgcttccatatattctgcc
agtaaagtggctttggaagagtttcccgatttagatattaccgttcgcggtgctattagt
attggtcgtcggttacaagatccactcgcggaactggtgaaaattgatcctaagtccatc
ggcgtgggacaataccagcatgatgtggaccaaaagttgttgaaaaagaagttggatgaa
actgttgaaagctgtgttaactacgttggtgtggacttaaatactgcttccaaagaactt
ttgacttctgtctctgggattacgtccagcgttgccaataatattgttgcttatcgtaac
cagcatggtgtgtttaaaaatcgccgacagttgctcaaagtcgccaagttaggaccaaaa
gcttttgaacaggcggcgggattcttacggattcgccaaagtgaaaacccattggataat
actgctgttcacccagaaagttactcacttgtagaggcgatcgcctccgatttgaaccta
ccactaactcaaatcacccaaattgccgaaaagctaaaaaaagccaatcttaagaaatac
gtcaccgacaccgttggcgaaccaacactgcgcgacatcctcagcgaattggaaaagcca
ggaagagatccacgcgctgagtttaagtatgcaacattcaaggaaggaatcaaggaaatt
tctgatctcaaagaagggatggaactagaaggtatcgttaccaatgttgcgaacttcggt
gctttcgttgatatcggtgtacatcaagatggtttggtgcacatctcccaattggctgat
agattcgttgatgatccaaagaaaattgtcaaggtgggacaagttgtgaaagtgcgagtg
ctggaaattaatcagaaattgaagcggattagtttatccatgaagtcaatcaagcaataa
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