Brasilonema octagenarum: DP113_25030
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Entry
DP113_25030 CDS
T10103
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
box Brasilonema octagenarum
Pathway
box02010
ABC transporters
box03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
box00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DP113_25030
03070 Bacterial secretion system
DP113_25030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
box02000
]
DP113_25030
02044 Secretion system [BR:
box02044
]
DP113_25030
Transporters [BR:
box02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DP113_25030
Secretion system [BR:
box02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DP113_25030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
cNMP_binding
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_30
AAA_23
AAA_21
RsgA_GTPase
DUF87
AAA_16
KAP_NTPase
NB-ARC
Ploopntkinase3
Motif
Other DBs
NCBI-ProteinID:
QDL17090
LinkDB
All DBs
Position
complement(5935847..5938885)
Genome browser
AA seq
1012 aa
AA seq
DB search
MTYTKTTIHDFLAELFPFDQLPTATLTKLGEKVQLLRYSMGQTILLPEHIPAQISILYEG
QARLLSYAPHTQTPVTLQLLKKGDILGWTSLLRGIPCETVIASTETICLTLEATEFLDLL
KHNPTFAKGFENRCSVSEVFELLGAELAQQADSKVILLSSGASDIKELTFKVLKEAVVFT
LPQGKTLLKQLDSNLVWFVSGGKLKNLPVGSRLQLKDGPTQLNVSDKKSAVRLVGIPKAT
LSPKASRSTEESTQRNLEKNLSLEDIPLGPKRPPKLVAKIDSDDERCGSRRLRRSPSHKY
PYIHGRGSVEATLACFQMLSQYWHIPFRQDVIRKVVNNQIQRTQSLSLQLCGAVAELMGL
NAQLIHIPASAVTRLQAPAIIRWQDSFAILYEISEQKLILAIPESGIVQQKPAKFIENWG
DEGQVLLLKPTKSTPKQRFSLRWFIPSLFKYRKVLFEVLLASFFVQIFTLANPLIIQVII
DKVIIQNSFDTLHVMGILLLILAVFEGLLTSLRTYLFVDTTNRIDLTLGSEIIDHLLRLP
LRYFERRPVGELATRANELENIRSFLTGTALTVVLDAVFSLIYILVMMVYSWLMTLVALA
TVPLFALLTALVSPIVRRQLREKAVRNAQTQSYLVEVLSGIQTVKAQNIELRSRWQWQEH
YSQYVTAGFQTVITSTTASATSHFLNQVSGLLILWMGSYLVLQGQLSLGQLIAFRIIASY
VTAPLLRLTQLWQNFQETALSLERLADIVDTPIEADETDRNNIPMPAIKGAVTYENVSFR
FNPSGPLQLVNINLDFTPGQFVGIVGQSGSGKSTLMKLLPRLYDIESGRILIDDYDIAKV
ELYSLRRQIGMVLQDSLLFDGTVQENIALTNPDATTEEIIEAAKIAAAHDFIMSLPNGYN
TRVGERGSALSGGQRQRIAIARTVLQNPHLLVLDEATSALDYHSERQVCLNLAKAFQGRT
VFFITHRLSTVKHADVILLLDKGAAVEQGTHAQLMAQRGRYYCLYQQQETQL
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgacttacaccaaaactactattcacgattttttggctgaattattcccattcgatcaa
ttgccaacagcaaccctaacaaaattaggcgaaaaagtacagcttttgcgctacagcatg
ggtcagacaattctcctgcccgaacacataccagctcaaatatccattctctacgaagga
caagcacgcctattaagttacgctcctcacacccagacgcctgtgacactacaattactt
aaaaaaggagacatcctaggttggactagcttgctacgagggattccttgtgagacggtc
attgcctctactgaaacaatctgtttaactttagaagcgacagagtttttagacctgcta
aaacataaccctacttttgcaaaaggctttgagaatcgctgtagtgtgagcgaagttttt
gagctattgggtgctgaactggcgcagcaagctgatagcaaagttatactgctttcctct
ggtgcatccgatattaaagaactgactttcaaagtcttaaaggaagcagttgttttcacc
cttccacagggcaaaactcttctaaaacaactagactccaatctagtctggtttgtcagt
ggtggaaagctgaagaatcttcctgtgggaagtcgcttacaactaaaggatggaccaacc
caattaaacgtctctgataagaagagtgcggttcgcttggtgggtatcccaaaagcaact
ctttctccaaaagcttctagaagcacagaagaatcaacacagagaaatttagaaaaaaat
ttatcgctggaagatataccattaggaccgaagcgtcctcctaagctggtagcaaaaata
gattctgatgatgagcgatgcggaagccgccgccttcggcgatcgccatcgcacaaatat
ccttatatccacggcagaggttcagtagaggcaactttagcttgcttccagatgctgagt
caatattggcacattccctttcgccaagatgtgattcgcaaagtcgtcaacaatcagatt
cagcgcactcaaagcctttcgttacaactatgcggtgctgtggctgaattaatggggtta
aatgctcaattaatccatattccagcatcagctgtgacaagattgcaagctccagccatc
attcgctggcaggatagtttcgcaatcctttacgaaatcagcgaacaaaagctgatactt
gcaataccggaaagtggcattgtgcagcaaaagccagccaagtttatcgaaaactggggt
gatgaaggtcaagtattgctgcttaaacctaccaaatctactcctaagcagcggtttagt
ttacgttggtttatcccttctctttttaaataccgcaaagttctttttgaagtcctgctt
gcttcattttttgtccaaatctttactttagcgaatcctttaattatccaggtgattatt
gataaagtcattattcaaaacagctttgatactttgcatgttatgggaattttgctgtta
attctagctgtttttgaagggcttttaacgagtctccgtacttatttatttgtcgatacg
actaaccggattgacctgactttaggatcagaaattattgaccatctgttgcgtctaccc
ttgcgctattttgaaagacgacctgtaggagaactcgcaacaagagcgaatgaactcgaa
aatattcgttcattcctaacaggaactgctttaactgtggtgttagatgcggttttttcc
ctcatctacattttggtgatgatggtttacagttggctgatgactcttgtggctttggca
actgttcccttgtttgcactgctcacggcgttggtttccccgattgtgcgacgacaactg
cgagagaaagctgtgcgtaatgcccaaactcagtcctatttggtggaggtgctgtcaggt
atccaaaccgtgaaagcacaaaatattgagttgcgatcgcgctggcaatggcaagaacac
tacagtcagtatgtgactgctggttttcaaactgtgatcacttccacgactgccagtgcc
actagccattttctcaaccaagtttctggtttattaatcctgtggatgggatcttactta
gtacttcagggacaactaagcctaggacaactcatcgccttccgcatcattgccagctat
gtcactgctcctttactacgattaacccaactgtggcaaaacttccaagaaacggctctc
tctctagaacgcctcgccgatattgtggatactcccattgaagctgacgaaacagatcgc
aataacattcctatgcctgccatcaaaggcgctgtcacgtatgaaaatgtctcgtttcgc
tttaaccccagtggtccccttcagcttgtgaatattaacctcgattttacacctggacag
tttgttggcattgtcggacagagtggttctggtaaaagcaccttgatgaagcttttacct
cgactttatgacattgagtccggcagaattctcattgatgactatgacattgccaaggta
gaactttattccctgcgccgtcagatagggatggtgcttcaggactcactcttgtttgat
ggtactgtacaggaaaatattgccctgacaaatccagatgccacaacagaagaaattatt
gaggctgctaaaattgctgctgcccatgattttattatgtctttgccgaatggctataac
accagagtcggggagagaggttcagctttatctggaggacaacgacagcgaattgcgatc
gctcgtacagttttacaaaacccccatttactcgttctcgacgaagccaccagtgcccta
gattaccattctgaacggcaggtatgcctcaatttagcaaaagcgttccaggggcgtacg
gtctttttcattacccatcgtttaagcactgtcaaacatgctgatgtcattttgctgctc
gataaaggagcagctgtggaacaaggaactcacgcacaactgatggctcaaagaggtcgt
tattactgcctttatcagcagcaagaaacacaactttaa
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