Brasilonema octagenarum: DP113_25145
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Entry
DP113_25145 CDS
T10103
Name
(GenBank) deoxyribodipyrimidine photo-lyase, 8-HDF type
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
box Brasilonema octagenarum
Brite
KEGG Orthology (KO) [BR:
box00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
box03400
]
DP113_25145
Enzymes [BR:
box01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DP113_25145
DNA repair and recombination proteins [BR:
box03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DP113_25145
Prokaryotic type
DP113_25145
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QDL17113
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Position
5964450..5965886
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AA seq
478 aa
AA seq
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MSDLILFWHRRDLRISDNTGLATARKQSPKVVGVFCLDPNILERDDIAPARVTYMIGSLQ
SLQERYAQAGSQLLILHAEPTQAIPKLAIALKAKAVFWNWDVEPYSQERDRTIIEALKEK
GIQFLEKNWDQILHSPDDIRTGSQQPYTVYTPFWKNWSSKPKAKPVETLENAEGLTKAEK
EIAEASGVIELPSAKDLGFHWDGELVITPGEAAAQERLEEFCASAVNEYQEQRNFPAVEG
TSKLSAALKFGVIGIRTVWQATLEALENSRSDETATNIRTWQQELAWREFYQHAMYNFPQ
LAEGAFRDPFKNFPWENNEEYFQAWCEGRTGYPIVDAAMRQLNELGWMHNRCRMIVASFL
TKDLLINFQWGEKYFMQKLIDGDLSANNGGWQWSASSGIDPKPLRIFNPASQAQKFDFEG
EYIRQWVPELRSMDAEYLVTGKISPLERHAVGYPDPIVDHNKQQRLFKERYQQQKSQT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttaattttattttggcatcgtcgcgatttacgtatttctgacaatacaggg
cttgctactgcgagaaagcaaagtccaaaggtggtgggtgtgttttgcctcgatccaaat
attttggaacgagatgatattgccccggcaagagtgacttacatgattggtagtttacag
tcactacaggagcgatatgctcaagcaggtagccagttattgattcttcacgctgaaccg
actcaagctattccaaaactggcgatcgctctgaaggcaaaggctgtattttggaattgg
gatgtggaaccgtattctcaagaacgcgatcgcacgattatcgaagcactcaaagaaaaa
ggtatccagtttctagaaaaaaactgggatcaaatcttacactcaccagatgatattcgt
actggttcccagcaaccttacaccgtttacactcccttttggaagaattggagtagcaaa
ccaaaagctaagcctgtagaaactttggaaaatgccgaaggattgacaaaagccgaaaaa
gaaattgccgaagcttcaggagttatagaattaccctcagccaaagatttaggttttcat
tgggatggagaattagttataacgccaggggaggcggcggcgcaagaacgattagaggag
ttttgcgccagtgcggttaatgaatatcaagaacagcgcaattttccagcagttgaaggt
acatctaaattgagtgctgctttgaaatttggtgtcattggtattcgcactgtttggcaa
gccactttagaagcgctagaaaatagtcgcagtgacgaaacagcaaccaacatccgtaca
tggcaacaggaactagcatggcgggagttttatcaacacgcaatgtataacttcccgcaa
ttagcagagggtgctttccgcgatcctttcaaaaactttccctgggaaaataacgaagaa
tattttcaagcttggtgcgagggtagaactggctatcccatcgttgatgcagcaatgcgc
cagctaaatgaactgggttggatgcataaccgctgtcggatgattgtcgcgagtttctta
accaaagacttgctgattaatttccagtggggagaaaaatactttatgcagaagctgatt
gatggtgatttatctgctaataatgggggttggcaatggagtgcttctagcggtattgat
ccaaaacctttgcgaatttttaatcctgccagtcaagcgcaaaagtttgactttgagggc
gagtacattaggcaatgggttcccgaattgcgttctatggatgcagagtatttagtaact
gggaaaatttctcctttggaacgtcatgctgttggttatccagatccaattgtggatcat
aataaacagcaacgactgtttaaagagcgttatcaacagcaaaaaagtcagacataa
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