Brasilonema octagenarum: DP113_28775
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Entry
DP113_28775 CDS
T10103
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
box Brasilonema octagenarum
Pathway
box00550
Peptidoglycan biosynthesis
box01100
Metabolic pathways
box01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
box00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DP113_28775 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DP113_28775 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
box01011
]
DP113_28775 (mrdA)
Enzymes [BR:
box01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DP113_28775 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
box01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DP113_28775 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QDL17713
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All DBs
Position
complement(6850214..6852067)
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AA seq
617 aa
AA seq
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MSTVKSRPSSKNREVRTVGQGLQPIFFIVFTLLMITGINIRLGYLQILQGHKFKERAQAN
RVRTISKQPERGNIFDRNGKLLATTRYPRSVYLWPMAHTKPSWSVVAPRLEKILNIPQEE
IEKKLDEAGASATNLVRIARDLSDAEITALKEYENELPDVQINTEAVRYYPHGKELAHIL
GYTRELTPEQLKKKKSEGYRLQDVIGQMGVEKAYEQVLRGEWGGQQVEVDSKGRPIRVLG
EKQAKAGNDIHLTVDLDVQKAAQKALTLPRGAVVALDPNNGAVLAMVSHPNFDPNIFSKQ
RLSQKDWQTLQGSEHPLVNRALSAFPPASTFKIITTTAGLESGKFSPSTVLQTYGSLTVG
GVTFGEWNHAGFGPLGFPRAMAMSSDTFFYQVGRRVGGPTLIEWTRKYGFGQKTGFEFSN
EESKGNVPDDAWKRKVWKMPWTVGDTINMSIGQGALQVTPLQAAIMFAVPANGGYRVKPH
LLKDHEEAKNWRESLNMKPSTIKVLREGLRKVVTEGTGTRLNLPSIAPAAGKSGTAEAGI
NRPNHTWFGAYAPADKPEIVVVAFGENSGGHGGTDCGPIVLQVLQEYFQKKHPGKYQKSE
SEESKVKTRNSRDRSGD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagtaaagtcccgtcctagcagcaaaaatagagaagtacgtacagtcggacaa
ggtttgcagcctatattttttattgtatttaccttgttgatgatcactggtatcaatatt
cgcttaggatatttgcaaattcttcaaggacataaattcaaggaacgagcacaggcaaac
cgggttaggacaatttcaaaacaaccagaacgaggtaatatttttgaccgcaatggaaaa
ctgttagcgacaactcgctatccgcgttctgtatacttgtggccaatggcacacactaag
ccatcctggtcagtcgtcgctccgcgtcttgagaaaattcttaatataccccaagaggag
atagaaaagaagttagacgaggctggtgctagcgccactaatttagtacggattgctcgc
gacctcagcgacgcagaaatcactgcattgaaggagtatgaaaacgaactaccagatgtt
caaattaatacagaagccgtacgctactacccgcatggcaaggagttagctcatatactc
ggttatactagggagttaacgcccgaacagttgaaaaaaaagaaatcagaaggctaccgg
ttgcaagatgtgattggtcagatgggggtagaaaaagcgtatgaacaagtgttgcggggt
gaatggggtggtcagcaagtagaagtagatagtaaaggtcgcccaattcgagtcttagga
gaaaaacaagcaaaagcaggtaatgatattcacctgacagtagatttagatgtacaaaag
gcagcccaaaaagctttgacattacctaggggtgcagttgtcgcattagaccccaataac
ggtgcagttttggcaatggtgtctcatcctaattttgacccgaatatcttctcgaagcaa
agactttcccagaaggactggcaaactctacaaggtagtgaacatcccctagttaatcgc
gccttgagtgcttttccacctgcgagtactttcaaaatcattaccacaactgcggggttg
gaatcaggtaaattttctcccagcacagtgctgcaaacttacggttctctgactgttggg
ggagttacctttggtgagtggaaccacgcgggatttggtccattgggatttccgcgtgct
atggctatgagtagcgatacatttttctaccaagttggtcgcagagtcggtggtccaacc
ttgattgaatggactcgcaagtatggatttggtcaaaaaaccggctttgagttttcaaat
gaagaatcaaaaggtaatgttccagatgatgcttggaagcgaaaagtgtggaagatgcct
tggactgtaggcgacactatcaatatgtccatcggtcaaggtgctttgcaagtcactcca
ctgcaagctgcgatcatgttcgcagttcctgctaacggtggttatagagtgaaaccacac
ttgctcaaagaccatgaagaagcaaagaactggcgggaatctctgaatatgaaaccaagt
actatcaaagttctccgcgaaggattgcgcaaagtagtcacagaaggtaccggaacacga
ttaaacctaccatcaattgcccctgctgcgggtaagagtggtactgctgaagctggtatt
aatcgcccaaatcatacttggtttggagcatacgccccagcagataagccagagatagtc
gttgtagcgtttggtgaaaactctggtggacacggtggtaccgactgcgggccaattgtc
ttacaggtcttgcaagagtattttcagaagaagcatccaggtaagtatcaaaaatctgag
tctgaagaatcaaaagtgaaaactagaaactcaagagatagatctggagattaa
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