Brasilonema octagenarum: DP113_28900
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Entry
DP113_28900 CDS
T10103
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
box Brasilonema octagenarum
Pathway
box03030
DNA replication
box03430
Mismatch repair
box03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
box00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DP113_28900 (dnaX)
03430 Mismatch repair
DP113_28900 (dnaX)
03440 Homologous recombination
DP113_28900 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
box03032
]
DP113_28900 (dnaX)
03400 DNA repair and recombination proteins [BR:
box03400
]
DP113_28900 (dnaX)
Enzymes [BR:
box01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DP113_28900 (dnaX)
DNA replication proteins [BR:
box03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DP113_28900 (dnaX)
DNA repair and recombination proteins [BR:
box03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DP113_28900 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Intein_splicing
DNA_pol3_gamma3
DnaA_N-like_STI
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
PT-HINT
AAA_16
TIP49
Gryzun-like
AAA_18
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QDL17736
LinkDB
All DBs
Position
complement(6876313..6879609)
Genome browser
AA seq
1098 aa
AA seq
DB search
MSYEPLHHKYRPKSFAELVGQEAIATTLTNAIRAAKIAPAYLFTGPRGTGKTSSARILAK
SLNCLKSDKPTPQPCGVCDVCQGITKGYSLDVIEIDAASNTGVDNIREIIERAQFAPVQC
RYKVYVIDECLTGDSLVLTDRGLVRIDDPNIKGKRVLSYNDSSLKWEFKKVLRWLDQGER
QTLVIKTTNREIKCTGNHLIKTDQGWVPAKDVKEGMRILSPVNVDAVLSSTNLAQMDAFG
DLFLGTNLKVIPTGKKHTIWNPSLKKLNYSVPYVPVVAQKNLISLPFYNKKVEDLVACSL
TGKDIHTRKGTEFGNLEQNISLPMPKFSNQKHWDLFTERYWEIAPSLTQINSVDSLDWLS
DMDSSSKNGWNTKPNALQYSDQNFSQHLTEATVLEISRSIATHPAILNSGKFLISSNPVG
IKNGFRWSGSIKLLQKDLLGGTWTTAHSVLPLQEVQGLDYTQRDFLPKKIKSLAIGLQQW
GIQQQKFTAEVTETRHTATLTWVQAVKNGSQTFKDIQFPQWITSLETVESVHLGEIERVY
DIEVEDNHNFVANGLSLHNCHMLSTQAFNALLKTLEEPPKQVVFVLATTDAQRVLPTIIS
RCQRFDFRRIDLEAMTKHLSHIAYKENIDITIEAITLIAQIAQGGLRDAESLLDQLSLLS
CEIIPERVWDLVGSVSERDLLFLLNAIASNNPEAVLDCARQILDRGREPLIILQNLAAFY
RDLLIAKTASNRNDLVACTPQTWEALIDFAQHFDISTILVGQQHLRTAEVQLKNTTQPRL
WLEVTLLGLLPSAHISVPQNGRGAVSVPTISLPTVSPSLGKSEQNSITSREPPSVSAPEN
NSKTVEPVKIDQTHTLPKTPATPSSPQRTPISPNPPKPQPEIEVPISVSQTQEVSQSTEI
DLTQVWQEVLSNLEPISTRELFRQMCYLVEFDGTVARVAIPKAWYKKVQLDLPIIAAAFK
KTFKCEVKINLEIATTSTSARPQTSRQKKPTTRPSYEPPSAPSPEVPKSTKPPITKSPNP
ANTPAVESSHTTHRSDPPSPTQPSASTPDWEVDEVTAAAQNLAQFFYGEVIPLTHDTERS
TSTTPSECEDQPEADDEF
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgaacccctgcaccacaagtatcgcccaaagagttttgctgaactggtggga
caagaggcgatcgctaccaccctaacaaacgctatccgcgccgccaaaatagcccctgcc
tacctgttcaccggtcccaggggtacagggaaaacttccagtgctcgcattttggcaaaa
tcgcttaattgtctcaaaagtgacaaacccacgcctcaaccctgtggtgtgtgtgatgtt
tgtcagggaattactaagggctattctttagatgttattgaaatagacgctgccagcaac
actggtgttgataatattcgcgaaataatagaaagagcgcaatttgctcccgtacagtgt
cggtacaaagtttatgttatcgatgagtgcctgactggagactctttggtcttgactgat
aggggacttgttagaatagatgatcccaatatcaaaggcaaaagggttcttagttataac
gattcatcgctcaagtgggaattcaagaaagttctgagatggctagatcagggtgagcgt
caaactctggttattaaaacaactaaccgagaaatcaaatgcacgggcaatcatttaatt
aaaacagaccagggatgggtaccagcaaaagacgtaaaagaaggaatgaggatactatcc
cctgtgaatgtggatgcggtactctcatctacaaatttggcacagatggacgcattcgga
gatttgttcctgggcaccaatttaaaggtaatacctacgggcaaaaaacatacgatctgg
aatccatccttaaagaagctgaattactccgtcccttatgtgcctgtggttgcacagaaa
aacttgatatccctacctttttacaacaaaaaggtagaggacttggtagcatgcagtctc
actggaaaagacatccatacaagaaagggcacggaatttgggaacttagaacagaacatt
tccttgccaatgccgaagttctccaaccagaaacactgggacttatttacggaacgctac
tgggagattgctccgtcacttacccaaataaattcagtagattccctagattggctttcg
gacatggacagcagcagcaaaaatggttggaatacaaagcccaacgccttgcagtactcc
gaccaaaacttttctcagcacctaacagaggctacggttctggaaatatcgcggtctatt
gcaacacatcctgccatcctcaactcagggaagtttttgatatcgtcaaacccagtgggg
ataaaaaacgggtttcgatggagtggctcaatcaagttactccagaaggacttgcttggt
ggtacatggacgacggctcactcagttttaccacttcaggaagtccaaggattagattac
acacagagggattttctcccgaagaaaatcaaatccttggcgattggcttgcagcaatgg
ggtattcaacaacaaaagtttacagcagaagtaacggagacaagacatactgctacatta
acgtgggtgcaagcagtaaaaaatggatctcagaccttcaaagatattcaattcccacaa
tggattacaagtttagaaactgttgaatctgttcatctgggtgaaattgagcgagtctat
gatatcgaagttgaggataatcataactttgttgctaacgggctttccttgcataactgt
cacatgctcagtacacaagcattcaatgcgctactaaagacactcgaagaaccaccgaaa
caagttgtctttgtactagcaacaactgacgcgcaacgagtcttacctaccataatttct
cggtgtcaacgcttcgactttcgcagaatagatttagaagcgatgacgaaacacttgagt
cacatcgcttacaaagaaaatattgatattactatcgaagcgataaccttaatagcccaa
attgctcaaggcggattgcgagatgcagaaagtctgctcgatcagttaagtttattgtcg
tgtgaaatcatacctgagcgagtttgggatttggttggttcagttagcgaacgcgattta
cttttcttgctgaatgcgatcgcctctaacaacccagaagctgttttagattgcgctcgt
caaatcttagatcgcggtcgagaacctttgattattctccaaaatctcgctgcattttac
cgagatttactcatcgccaaaactgcctctaatcgcaacgatttagttgcttgtactccc
caaacttgggaagcactgattgattttgcccaacactttgacatcagcacaatcttggtg
ggacagcaacacttgcgaaccgctgaagtgcaactaaaaaacaccacacaaccgcgtttg
tggttagaggtgacgttgctgggattgttaccctcagctcatatctcagttccgcaaaac
ggtagaggcgcagtttccgtaccaacgatttcgctgcctacagtttcaccatctttagga
aaaagtgaacaaaactcaattacaagccgtgaaccaccttcagtatcagcaccagaaaac
aattcaaaaactgtagaaccagttaaaattgaccaaacccataccttaccaaaaactcct
gctaccccctcatcaccacaacgaaccccgatttctcctaatcctccaaaaccacagcct
gaaatagaagtacctatttcagtatcccaaacacaggaagttagtcagagcacagaaata
gacttaactcaggtttggcaagaagtgctgagtaatctcgaaccaatctcaacacgagag
ctatttcgtcaaatgtgctatcttgtagaatttgatggtactgtagctcgtgttgctatt
ccaaaagcatggtataaaaaagtacaattagatcttcccataatcgcagcagcatttaag
aaaacttttaaatgcgaagtcaagataaacctagaaatagcaacgacatcaacttctgcc
cgacctcaaacttctcgtcaaaaaaagcccacgactcgtccgagttatgaacctccatcc
gcgccttctccagaagttcccaaatcaaccaaaccaccgataacaaaatccccaaatcca
gcaaatactcctgcggtggaaagttcacacacaactcatcgcagtgatccaccctcccca
actcaaccatccgcgtccacacccgattgggaagttgatgaagtcacagccgccgcacaa
aatctggcacagttcttttatggagaagtcatcccattgacacatgacacagaacgctca
acttcaacaaccccaagtgagtgtgaagatcaaccagaagctgatgatgagttttaa
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