Bradyrhizobium ontarionense: LQG66_06820
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Entry
LQG66_06820 CDS
T10106
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
boy Bradyrhizobium ontarionense
Pathway
boy03030
DNA replication
boy03430
Mismatch repair
boy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQG66_06820 (dnaE)
03430 Mismatch repair
LQG66_06820 (dnaE)
03440 Homologous recombination
LQG66_06820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boy03032
]
LQG66_06820 (dnaE)
03400 DNA repair and recombination proteins [BR:
boy03400
]
LQG66_06820 (dnaE)
Enzymes [BR:
boy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQG66_06820 (dnaE)
DNA replication proteins [BR:
boy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LQG66_06820 (dnaE)
DNA repair and recombination proteins [BR:
boy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LQG66_06820 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
UFZ06016
LinkDB
All DBs
Position
complement(1537989..1541519)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSSAGFVHLHVHSAYSLLKGSIKIAKLGELAKADRQPALALTDTDNMFGGLEFSDKMAGY
GIQPIVGCELAIDFGDMDPNARNAAAVAQPSRIVLLAAREEGYRHLMRLNSRAFLDTPTH
QAPHIKFDWLKEGVDGVIALTGGPDGPISLAIQHDMAALATQRCERLASLFGDRLYIELQ
RHGVDRERRVESGLIDIAFGKGLPLVATNEPYFATTDDYEAHDALLCIAGGHLIADTERV
QLTPEHRFKTRAEMAVLFADIPEALASTVEIAERCSYRPRTRKPILPLFTVGAGTGTDAV
DAASAEAAELKRQAEEGLERRLKVHGMAPGMTEEDYQKRLAFELDVIMRMKYAGYFLIVS
DFIKWAKAHGIPVGPGRGSGAGSLVAWVLTITDLDPMRFALLFERFLNPERVSMPDFDID
FCQDRRGEVISYVQQRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQ
NPAAPVTLAAAIEGEPKLQAFRDEDPVVARAFDIAMRLEGLTRHASTHAAGIVIGDRPLS
ELVPMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRDVHVDLAT
LPIDDAPSYQMLARGDVVGVFQVESQGMRRALIDMRPDRFEDIIALVALYRPGPMANIPT
YCARKHGEEEPEYLHPILEPILKETFGVIIYQEQVMQVAQQMSGYSLGEADLLRRAMGKK
IRAEMDKQRVRFVEGATQNGVPKDQADTIFDLLAKFADYGFNKSHAAAYALVSYHTAYMK
AHYPVEFIAASMTLDLNNTDKLSEFRAEAQRLSIKVEPPSINRSGPTFEVSGNTIFYALA
ALKGVGPQAIEMIVEARNKGGPFTSLADFAARVNPRAINKRIIETLAAAGAFDGLDKNRA
RVFAGADAIVAACQRANEAATSGQNDMFGNAADAPAIILPNIENWLPAERLRREYDAIGF
FLSGHPLDDYAAALKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMG
LSDPTGHFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGDDVRARVLHAEPLDDAAAKT
QRGLRIFLRDTKPLDSIVRRLQGPEAAPANGHGAAAKAAAPPLAPRAAAGEGEVSLVMML
DLETEVEMKLPGRFKVSPQIAGAIKAVTGVVDVQQL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgccggattcgtccatctccacgtccattccgcctattcgctgctgaagggc
tcgatcaagatcgccaagctgggcgagctcgccaaggctgaccgccagccggcgctggcg
ctgaccgacaccgacaacatgttcggcgggctcgaattctccgacaagatggcgggctac
ggcatccagccgatcgtgggctgcgagctcgcgatcgacttcggcgacatggaccccaat
gcccgcaacgccgccgcggtggcgcagccgtcgcgaatcgtcctgctggcggcgcgcgag
gaaggctaccgccacctgatgcggctgaactcgcgcgcgtttctggacacgccgacgcac
caggcgccgcacatcaagttcgactggctgaaggagggcgtcgatggcgtgatcgcgctg
accggcggtccggacggcccgatctcgcttgcgatccagcacgacatggccgccttggcg
acgcaacgctgcgagcggctggcaagcctgttcggcgaccgcctgtacatcgagctgcag
cgccatggcgtcgatcgtgaacgccgcgtcgagagtggtttgatcgacattgccttcggc
aaggggctgccgctggtggcgaccaacgaaccctatttcgcgacgaccgacgactacgag
gcgcatgatgcgctgctgtgcatcgccggcggccacctcatcgccgataccgagcgcgtg
cagctgacgccggagcatcggttcaagacgcgcgccgaaatggcggtgctgtttgccgac
attccggaggccttggcctcgacggtcgagatcgccgagcgctgctcgtatcggccgcgc
acgcgcaagcccatcctgccgctgttcacggtcggcgccggcaccggcaccgatgccgtg
gacgccgcgagcgccgaggcggccgagctgaagcgacaggccgaggagggcttggagcgg
cgcctcaaggtgcacggcatggcgccgggcatgaccgaggaggactatcagaagcggctg
gcgttcgagctcgacgtcatcatgcgcatgaaatatgcgggctacttcctgatcgtgtcc
gacttcatcaaatgggcgaaggcgcacggcattccggtcggcccgggccgcggctccggc
gccggctcactggtggcctgggtgctgaccatcaccgacctcgacccgatgcgcttcgcg
ctgctgttcgagcgcttcctcaatcccgagcgcgtgtcgatgccggacttcgacatcgac
ttctgccaggaccgtcgcggcgaggtgatctcctacgttcagcagcgttacggccgcgac
caggtggcgcagatcatcactttcggcacgctgcaggcgcgcggtgtgctgcgcgacgtc
ggccgcgtgctgcagatgccctatggccaggtcgacaagctcaccaaattggtgccgcag
aatccggccgcgccggtgacgcttgccgcggccatcgagggcgagccgaagctgcaggcg
ttccgtgacgaggacccggtggtggcgcgcgccttcgacatcgcgatgcgcctcgagggt
ctgacgcggcacgcctcgacccacgctgcaggcatcgtgatcggcgaccgcccgctcagc
gagctggtgccgatgtatcgcgatccgaaatcggacatgccggtcacccagttcaacatg
aagtgggtggagccggccggcctcgtcaagttcgacttcctcggcctgaagacgctgacc
gtgctcgatgtcgcggtcaagctcttgaagcagcgcgacgtccatgtcgatctcgcgacc
ttgccgatcgacgatgcgccgagctatcagatgctggcgcgcggcgatgtggtcggcgtg
ttccaggttgaaagccagggcatgcggcgggcgctgatcgacatgcgtcccgaccgtttc
gaggacatcatcgcgctggtcgcgttgtaccggccgggcccgatggcgaacatcccgacc
tattgcgcgcgcaagcacggcgaggaggagccggaatatctgcacccgatcctggagccg
atcctcaaggagaccttcggcgtcatcatctaccaggagcaggtgatgcaggtcgcgcag
cagatgtccggctattcgctcggcgaagccgacctgctgcgccgcgccatgggcaagaag
atccgcgccgagatggacaagcagcgtgtccgcttcgtcgaaggcgcgacccagaacggc
gtgcccaaggaccaggccgacaccatcttcgacctgctcgcgaagttcgccgactacggc
ttcaacaagtcgcacgcggccgcctatgcgctggtgtcgtatcacaccgcctatatgaag
gcgcactatccggtcgagttcatcgccgcatcgatgacgctcgatctcaacaacaccgac
aagctgtcggaattccgcgccgaggcgcagcgtctgagcatcaaggtcgagccgccgtcg
atcaaccggtcgggtccgaccttcgaggtcagcggcaacacgatcttctatgcgctggca
gcgctcaagggcgtcggaccgcaggcgatcgaaatgatcgtggaggcccgcaacaagggg
ggcccgttcacctcgctcgccgacttcgccgcccgcgtcaatccgcgcgcgatcaacaag
cgcatcatcgagacgctggccgcggccggcgccttcgatgggctcgacaagaaccgcgcg
cgcgtgtttgccggcgccgacgccatcgtcgcggcctgccagcgtgccaatgaggccgcc
acatcgggccagaacgacatgttcggcaacgccgccgatgcgcccgcgatcatcctgccg
aacatcgagaactggctgccagccgagcggctgcggcgcgaatatgacgcgatcggcttc
ttcctgtcggggcatccgctcgacgattacgccgcggcgctgaagcgcctgcgcgtgcag
agctgggccgagttctcgcgcgcggtgaagaccggcgcgaccgccggcaaggtcgccgcc
accgtggtgtcacgcatggagcgccgtaccaagaccggcaacaagatgggcatcatgggc
ctgtccgatccgaccggccatttcgaggccgtgctgttttccgaaggtctcgcgcaatat
cgcgacgtgctcgagcctggggctgcggtgctgctgcaactcggcgccgagctgcagggt
gacgacgtccgcgcccgcgtgcttcatgccgagccgctcgacgatgctgccgccaagacg
cagcgcggcctgcgcatcttcctgcgcgacaccaagccgctcgattcaatcgtcaggcgg
ctgcaggggccggaagcagcgccggccaacggccatggtgccgcggccaaggcggccgcg
ccaccgctggcgccgcgggccgccgccggcgagggcgaggtgtcgctggtcatgatgctc
gacctcgagaccgaggtggagatgaagctgcccgggcgcttcaaggtttcgccacaaatc
gctggcgccatcaaggcggtgaccggcgtggtcgacgtgcagcagctttga
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