Bradyrhizobium ontarionense: LQG66_13765
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Entry
LQG66_13765 CDS
T10106
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
boy Bradyrhizobium ontarionense
Brite
KEGG Orthology (KO) [BR:
boy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boy03000
]
LQG66_13765
Transcription factors [BR:
boy03000
]
Prokaryotic type
Helix-turn-helix
Other families
LQG66_13765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
HTH_8
AAA_lid_14
HTH_30
HTH_23
AAA_5
HTH_28
HTH_29
AAA_2
HTH_Tnp_1
HVO_A0261_N
HTH_7
HTH_22
Mg_chelatase
Phage_NinH
HTH_Tnp_Tc3_1
HTH_17
AAA_16
Sigma70_r4
HTH_38
HTH_11
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
UFZ07303
UniProt:
A0ABY3RJ09
LinkDB
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Position
3042756..3044702
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AA seq
648 aa
AA seq
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MDQRDVRAAWEKFVARGALSAELRSTVAASWQRSRQHCVTVDRAKAPLVAEAELFRQRSK
HASLRHAARCALQNSKTFLSDAGSIMILTDPTGLIVDTQGDARVIDAGRTVHLEHGGRWS
EADIGTNAIGTALAESRPVQIHGAEHFCTEVQRWTCAAVPVHDPSDGELLGVVDISGPAS
TFNPQSLALAVAVGHHVESVLAQLARQDKEQLLCDFIAKRASWATEECILLDRRGAILHA
TERGLRAMKDNGLNTDGDAPTRFLKTVQFEDWPAKLREILPHASFELVKNGSTGVGAIVV
MHARRRAAADRNAVTAKETRARDDATTSAPSRNLQAQPCRPPTKPAGNKSPGFVAQDPNV
LAIVRRVESAAARKMPILIRGETGTGKEQLARHAHAASGRAGAFVAVNCAALPDSLIEAE
LFGYADGAFTGARHGGATGLVKEADGGTLFLDEIGDMPVALQGVLLRLLDDWTVRPVGGT
AFKVDVFLVSATNAALDRAIAEGRFRSDLLYRLNTLEVRLPRLRERCDFDAIARQLLRKI
DPGCDITAAALARLAPNHWHGNIRELGNMLARLTLGVSNGVIDEACVEAMIGKVIGQPPP
PAPGSLQDVQRARILMVYAETAGNVSETARRLGVSRNTIYRALGQPRP
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacgggacgtacgggccgcatgggaaaaattcgtcgcgcgcggcgccttgtcg
gccgagctgagatcgacggtggccgcgtcgtggcagcgctccaggcagcactgcgtcacg
gtcgatcgtgcgaaagcgccactcgtcgccgaggcggaattgtttcgccagcgctccaag
catgcgtcgctccgccatgccgcgcgctgcgcgctgcagaactcgaagacgttcctgagc
gacgccggctcgatcatgatcctcaccgatcccaccggcctgatcgtcgacacccagggc
gatgcacgggtcatcgacgccggccgcacggtgcatctggagcacggcggacgctggagc
gaggctgatatcggcaccaacgccatcggcacggcgctggctgaatcacgaccggtccag
attcacggcgcagagcatttctgcaccgaagtccagcgctggacctgcgccgcggttccg
gttcacgacccgagcgacggcgagctgctcggcgtggtcgacatctcgggtccggccagc
accttcaacccgcagagcctggcgctggcggtggcggtcggccatcacgtcgaaagcgtg
cttgcgcagctggcccggcaggacaaggagcagctgctgtgcgacttcatcgccaagcgg
gcgtcatgggccaccgaggaatgcatcctgctcgaccggcgcggcgcgatcctccatgcg
accgagcgcgggctgcgcgccatgaaggacaacggcctcaacaccgatggcgatgcgccg
acgcgcttcctgaaaacggtccagttcgaagactggccggccaagctcagggagatcctg
ccccatgcgagcttcgagctcgtcaagaacggcagcaccggtgtcggcgcgatcgtagtc
atgcatgcgcggcgccgcgcagccgcggatcgcaacgccgtgaccgcgaaggagacgcgt
gcgcgcgacgacgccaccacgtcggctccgtcgcgaaacctgcaggcacagccgtgccgc
ccgcccacgaagccggccggcaacaagagtcccggcttcgtcgcccaggatccgaacgtg
ctagcgatcgtgcggcgcgtcgagagcgcggcggcgcgcaagatgccgatcctgatccgc
ggtgagaccggcaccggcaaggaacagctggcgcgccacgcccacgccgccagcggacgc
gccggcgcgttcgttgcggtcaattgcgccgccctccccgacagcctgatcgaggccgag
ctgttcggctatgccgacggcgccttcaccggcgcacggcacggcggcgccacggggctg
gtcaaggaggccgatggcggcacgctgtttctggacgagatcggcgacatgccggtagcg
ctgcagggcgtgctgctgcgcctgctcgacgattggaccgtgcggccggtcggcggcacc
gccttcaaggtcgacgtcttcctggtgtccgcgaccaatgccgcgctcgacagggccatc
gccgaggggcgattccgctccgacctgctgtatcgcctcaacacgctcgaggtccggctg
ccgcggctgcgcgagcgctgcgatttcgacgccattgcgcgccagctgctgcgcaagatc
gatccgggctgcgacatcaccgcggcggcgctggcgcgactggcgccgaaccattggcac
ggcaacatccgcgagctcggcaacatgctggcgcggctcacgctcggcgtctccaacggg
gtgatcgacgaggcctgcgtggaggccatgatcggcaaggtgatcggccagcctccgccg
ccggcgcctggatcgctccaggacgtccagcgcgcccgcatcctgatggtctacgccgaa
accgcgggcaatgtcagcgagacggcgcggcgtctcggcgtgtccagaaacacgatctac
cgcgcgctcgggcagccgcggccgtag
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