Bradyrhizobium ontarionense: LQG66_18820
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Entry
LQG66_18820 CDS
T10106
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
boy Bradyrhizobium ontarionense
Brite
KEGG Orthology (KO) [BR:
boy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boy01002
]
LQG66_18820
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
boy01011
]
LQG66_18820
Peptidases and inhibitors [BR:
boy01002
]
Cysteine peptidases
Family C82
LQG66_18820
Peptidoglycan biosynthesis and degradation proteins [BR:
boy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LQG66_18820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UFZ08402
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Position
4243247..4245340
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AA seq
697 aa
AA seq
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MAIAATFLAVSTTSALAQSDPPRPSAAELAIDAAIPLPEPANVPPPTASDFKPDTTATVS
PNPGKAPEGATKPADTAAAPSIEPTTNDPGKTIAAPPTASPATATAPEPGKDPVKAASNV
PAADQPVAERLRDMMATKATRYFDRKTERAAVEKFYTGRDYAPIWTQGGNLTAAAKGVIS
RLKEAAADGLNPADYPVPDFAAAASAPDALAEADLKLTESMLDYARQAQSGRMHWSQVSA
DIQYPEHPIDPSEVLANVTGAKDASAALDGYNPPHKLYKLLKAKLAELRGVGDGAPIIIE
DGEALKYTAARGKNAPEADAQMSDPRVPKLRAKLGITENADDIRYDAKVAAAVRKFQESV
DLKPTGVLDDRTVKALNTPKRDKQIDTVIVNMERWRWLPRDLGAPAIGDAYVILNIPDYT
LKVMQRGAQVWTTRVVTGKPGQHATPLLSETMKFITVNPTWNVPPSIIYNEYLPALQQDP
TVLDRMGLRLERARDGSIHISQPPGEANALGRVRFNFPNKFLVYQHDTPDKNLFARDERA
FSHGCMRVQYPDQYAAVLLNITMPNERYTPERIRSMYGSSEIDLKFPTPIPVNITYQTAF
VDDAGKLQFRKDVYGRDGTMISILKNNRGKDLENVVAHAQPNYSRPKGPLPSAVNVSDNS
FSSGSSSPNFFERLFGGGGQPTPPAPVGRPSRRVFTR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgcggcgaccttcctcgcggtgtcgacgacctcggctctggcccagagcgac
ccgccccgccccagcgccgccgaactcgccatcgacgcggccatcccgttgcccgagccg
gccaacgtgccgcctccgaccgccagcgatttcaagcccgacacgacagccaccgtgtcg
cccaatccgggcaaggctcccgagggcgcaacgaagccggccgacaccgcagccgctccc
tcaatcgagccgaccacgaacgaccctggcaagaccatcgccgccccgccgaccgcctct
cccgccaccgcaacggcccccgaacctgggaaagacccggtcaaggccgccagcaatgtt
cccgccgccgaccagccggtcgccgagcgattgcgcgacatgatggcaaccaaggccacg
cgttacttcgaccgtaagacggaacgcgccgccgtcgagaaattctacactggccgcgac
tacgcgccgatctggacccaaggcggcaacctgaccgcagcagcaaagggcgtgatctct
cgcctcaaggaggctgcagcggacggcctcaatcctgccgactatccggtaccggacttc
gccgccgctgcgtcagcgccagacgcgctggcggaagccgatctcaagctcaccgagagc
atgctggattacgcacggcaggcgcagagcgggcgcatgcactggtcgcaggtatcagcc
gatatccagtaccccgagcatccgatcgatcccagcgaggttctcgccaatgtcacgggc
gcgaaagacgcctccgctgcgctggacggctacaacccgccgcacaagctctacaagctc
ctgaaggccaagctcgccgagctccgtggcgtcggcgacggcgcgccgatcatcatcgag
gatggcgaggccctgaaatacaccgccgcgcgcggcaagaatgcgcccgaggccgacgca
cagatgtccgacccgcgcgtgccgaagctgcgcgccaagctcggcatcactgaaaacgcc
gacgacatccgctacgacgccaaggttgcggccgcagtccgcaagttccaggagagcgtc
gatctcaagccgaccggcgtgctcgacgaccgcaccgtcaaggcgctgaatacgcccaag
cgcgacaagcagatcgatacggtcatcgtcaacatggagcgctggcgctggctgccgcgc
gacctcggcgcgcctgccatcggcgatgcctatgtcatcctcaacatccccgactacacg
ctgaaggtgatgcagcggggcgcccaggtgtggacgacgcgcgtcgtgaccggcaagccc
ggccaacatgccacgccgctgctcagcgagaccatgaagttcatcacggtcaacccgacc
tggaacgtgccgccgtcgatcatctacaatgagtatctgccggcgctgcagcaggatccg
accgtgctcgatcgcatgggcctgcgtctggagcgcgcgcgggacggctcgatccacatc
tcgcagccacccggcgaggccaacgcgctcggccgcgttcgcttcaacttccccaacaag
ttcctggtctatcagcacgacacgccggacaagaacctgttcgcgcgggacgagcgcgcc
ttcagccacggctgcatgcgcgtgcagtatccggatcagtatgcggcggtgctgttgaac
atcacgatgccgaacgagcgctatacgcctgagcgcatccgcagcatgtatggctcgagc
gagatcgacctgaagttcccgacgccgatcccggtcaacatcacgtaccagaccgccttc
gtcgacgatgccgggaagctgcaattccgcaaggacgtctatggtcgggacgggaccatg
atctcgatcctcaagaacaaccgcggcaaggatctcgagaacgtcgtcgcccacgcccag
ccgaactattcgcgtccgaaaggaccgctgccgagcgccgtcaacgtcagcgacaacagc
ttctcgtcggggtcatccagcccgaacttcttcgaacgtctgttcggcggcggagggcag
ccgacgccgccggctccggtcggccggccgtcgcggcgggtgttcacgcgctga
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