Bradyrhizobium ontarionense: LQG66_19170
Help
Entry
LQG66_19170 CDS
T10106
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
boy Bradyrhizobium ontarionense
Pathway
boy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQG66_19170 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boy03019
]
LQG66_19170 (recQ)
03400 DNA repair and recombination proteins [BR:
boy03400
]
LQG66_19170 (recQ)
Enzymes [BR:
boy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQG66_19170 (recQ)
Messenger RNA biogenesis [BR:
boy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LQG66_19170 (recQ)
DNA repair and recombination proteins [BR:
boy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LQG66_19170 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Fic-like_C
Motif
Other DBs
NCBI-ProteinID:
UFZ01450
UniProt:
A0ABY3R289
LinkDB
All DBs
Position
4317366..4319243
Genome browser
AA seq
625 aa
AA seq
DB search
MPPAPNATTDTADRALSVLHSVFGLPGFRGAQEKVVRHVADGGNCLVLMPTGGGKSLCYQ
LPALLRKGCGIVVSPLIALMRDQVAGLLEAGVNAAVLNSTLSREEAHEVERRLISGDLDL
LYVAPERLVTPRCLSLLERAEIALFAIDEAHCVSQWGHDFRPEYIGLSVIAERFPDVPRI
ALTATADELTRKEIAERLSLTDAPQFVASFDRPNIRYEIVDKNNGPAQLKAFIKDRHAGD
AGVVYCLSRAKVEDTAAALTEAGITALPYHAGLDAGVRARNQDRFINEDGIVVVATVAFG
MGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSTAWMAYGLSDIVQQRRMIDESNG
AEAFKRVSIRKLDALVALAETAGCRRRLLLSYFGESPAAETCGNCDNCLSPPKVRDGKVI
AQKLLSCAYRTGQRFGAMHLIDVLVGRATERVKQFGHDQLSVFGIGRELNEKQWRAALRQ
VVAMGHLAPDSEAYGALKLTETSRGVLKGETAVMLREETASTARAIRSKSRRGDLVPRPG
QAADAPLLASLRAWRSDIARKRGVPAYVVLHDATIDGIAAARPTTSGQLRDIPGIGDKKL
EHYGDELLALIAAARPSGSGSPPDG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcccccaacgccaccaccgacacggccgatcgcgcgctgtccgtgctgcat
tcggtgttcgggctccccggcttccggggcgcgcaggagaaggtggtccggcatgtcgcg
gacggcggcaactgcctggtgctgatgccgaccggcggcggcaagtcgctgtgctatcaa
ctgccggctttgctgcgcaaaggctgcggcatcgtggtgtcgccgctgatcgcgctgatg
cgcgaccaggtcgccggcctgctcgaggccggcgtcaacgccgcggtgctgaactccacg
ctgtcacgcgaggaagcccacgaggtcgagcgacggctcatatcaggcgatctcgatctg
ctctacgtcgcgcccgagcggctggtgacgccgcgctgcctgtcgctgctggagcgcgcg
gagattgcgctgttcgccatcgacgaggcgcattgcgtgtcgcaatgggggcatgatttc
cgccccgaatatatcggcctctcggtcatcgccgagcgctttcccgacgtgccgcgcatc
gcgctgaccgcgaccgccgacgagctgacccgcaaggagatcgccgagcggcttagcctc
actgacgcgccgcagttcgtggcgagcttcgatcgtcccaacatccgctacgagatcgtc
gacaagaataacggaccggcccagctcaaggccttcatcaaggaccgtcacgccggagat
gccggcgtcgtctactgcctgtcgcgcgccaaggtcgaggacaccgcggccgcactgacc
gaggccggcatcacggcgctgccctatcacgccggactcgacgctggcgttcgtgcgcgc
aaccaggaccgctttatcaacgaggacggcatcgtggtcgtcgccaccgtcgcgttcggc
atgggcatcgacaagccggacgtacgcttcgttgcgcatctcgatctgccgaagagcatc
gaggcctactaccaggagacggggcgtgcggggcgcgacggcaagccctcgaccgcctgg
atggcctacggcctgtccgacatcgtgcagcagcgccggatgatcgacgagtccaatggc
gccgaggcgttcaagcgggtatcgatccgcaagctcgacgcgctggtggcgctcgccgag
accgccggctgccggcgcaggctgctcttgagctatttcggcgagagcccagcggcagag
acatgcggcaattgcgacaactgcctgtcgccgccgaaggtccgcgacggcaaggtgatc
gcgcagaagctgttgtcctgcgcctatcgcaccgggcagcggttcggcgccatgcacctg
atcgacgtgctggtcggacgcgcgaccgagcgcgtcaagcagttcggacacgatcaattg
tcggtgttcggcatcggccgcgagctcaacgagaagcaatggcgcgccgcgctgcgccag
gtggtggcgatgggccatcttgcgccggacagcgaagcctatggcgcgctgaagctgacg
gagacgtcgcgcggcgtcctcaagggcgagaccgcggtgatgctgcgcgaggagacggcg
agcacagcgcgcgcgatccgcagcaaatcgcggcgcggcgatctggtgccgcggccgggc
caggcagccgatgcacccctgctcgcgagtctgcgggcgtggcgctcggacatcgcccgc
aagcgcggcgtgccggcctatgtggtgctgcacgatgccacgatcgacggcatcgcagcc
gcgcgtccaacgacatcaggccagctccgcgacatccccggcatcggcgacaagaagctc
gagcattacggcgacgagctgttggcgctgatcgcggcggcaaggccgtcaggatcagga
tcgccaccagacggttga
DBGET
integrated database retrieval system
