Bradyrhizobium ontarionense: LQG66_19885
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Entry
LQG66_19885 CDS
T10106
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
boy Bradyrhizobium ontarionense
Pathway
boy00061
Fatty acid biosynthesis
boy00071
Fatty acid degradation
boy01100
Metabolic pathways
boy01212
Fatty acid metabolism
boy02024
Quorum sensing
boy04146
Peroxisome
Module
boy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
boy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LQG66_19885 (pimA)
00071 Fatty acid degradation
LQG66_19885 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LQG66_19885 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQG66_19885 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
boy01004
]
LQG66_19885 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boy04147
]
LQG66_19885 (pimA)
Enzymes [BR:
boy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LQG66_19885 (pimA)
Lipid biosynthesis proteins [BR:
boy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LQG66_19885 (pimA)
Exosome [BR:
boy04147
]
Exosomal proteins
Exosomal proteins of breast milk
LQG66_19885 (pimA)
Exosomal proteins of breast cancer cells
LQG66_19885 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UFZ01585
LinkDB
All DBs
Position
complement(4479762..4481435)
Genome browser
AA seq
557 aa
AA seq
DB search
MIHPGEQFYPEGVHWDAPIARGTLPDLLTQAVSEFGDRDALEFRDRPITFKQLSDLADQA
AAAFLRAGFGKDCSIALFLGNTPDHPINFFGALKAGARVVHLSPLDGEIALSHKLTDSGA
RILVTSNLSALLPTALKFLDRGLIDRLIVCEDDSWGNIGTPQTALPDNRDVITHRAFVDG
AAAPAAWPEITPDDVALLQYTGGTTGLPKGAMLTHGNLTAAVSIISLWGRATRSRSDGID
RVICVLPLFHIYALTVVLLSALRLGNLISLHQRFDVAAVMRDIEVKRATYFPGVPTMWIA
IANLPDLDKRDLSSLMSVGSGGAPLPVEVARILERRVGMKLKSGWGMTETCSPGTAHPKE
GPDKPGSIGIALPGIEMDVVSLEDPTKVLGVNEVGEIRIKGPNVTSGYWNRPEETTQSFV
DDRFLTGDIGYVDADGFFFLVDRKKDMIISGGFNVYPQMIEQAIYTYPAVQEVIVIGIPD
AYRGEAAKAFIKLRDGAAPFPVDDLRAFLTGKLGKHELPAAVEFVDELPRTPVGKLSRHE
LRQQKSSTSHGQHQQQQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatccatcctggcgaacagttctatcccgaaggcgtccactgggacgcgccgattgcg
cgcggcaccttgccggatctgctgacgcaggcggtgagcgagttcggcgatcgcgacgcg
ctcgagttccgtgatcggccgatcacattcaagcagctctccgatctggccgaccaggcc
gctgcggcgttcctgcgcgccggtttcggcaaggattgctcgatcgcgctgttcctcggc
aatacgcccgaccatccgatcaatttcttcggcgcgctcaaggccggcgcccgcgtggtg
cacctgtcgccgctcgacggcgagatcgcgctgtcgcacaagctcacggattccggcgcg
cgcatcctggtgacgtcgaatctgtccgcgctgctgccgaccgcgctgaagtttctcgac
agaggtttgatcgaccgcctgatcgtctgcgaggacgattcatggggcaacatcggcacc
ccgcagacggcgctgccggacaatcgcgacgtgatcacccatcgcgccttcgtcgacggc
gcggcagcgccggccgcgtggcccgagatcacgccggacgacgtcgcgctgctgcaatat
accggcggcaccaccggcctgcccaagggcgcgatgctgacgcacggcaatctgacggcc
gccgtctcgatcatctcgctctggggccgcgccacgcgatcccggagcgacggcatcgac
cgtgtcatctgcgtgctgccgctgttccacatctatgcgctgacggtcgtgcttctgtcc
gcgctgcgcctcggcaacctgatctcgctgcatcagcgcttcgacgtcgcggccgtcatg
cgcgacatcgaggtcaagcgcgcgacctatttccccggcgtgcccacgatgtggatcgcg
atcgccaacctgcctgatctcgacaagcgtgatctgtcgtcgctgatgagcgtcggctcg
ggcggcgcgccgttaccggtcgaggtcgcgcgcatcctggagcgccgcgtcggcatgaag
ctcaagagcggctggggcatgaccgagacctgctcgcccggcacagctcatcccaaggag
gggccggacaagccgggttcgatcgggatcgcgctgcccggcatcgagatggacgtggtg
tcgttggaagacccgaccaaggtgctgggcgtgaacgaggtcggcgagatccggatcaag
gggccgaacgtcaccagtggctactggaacaggccggaggagacgacgcagtctttcgtc
gacgatcgcttcctgaccggcgacatcggctatgtcgatgccgacggtttcttcttcctc
gtcgaccgcaagaaggacatgatcatctccggcggattcaacgtctatccgcagatgatc
gagcaggcgatctacacctacccggccgtgcaggaggtgatcgtgatcggcattcccgac
gcctatcgcggcgaggccgcaaaggccttcatcaagctgcgcgatggcgccgcgccgttc
ccggtcgacgatctccgcgcattcctcaccggcaagctcggcaagcacgagctgcccgct
gcggtcgaattcgtcgacgagctgccgcgcaccccggtcggcaagctgtcgcgtcacgaa
ttgcgccagcagaagtcatccacgtctcacggacaacatcagcaacaacaatag
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