Bradyrhizobium ontarionense: LQG66_23405
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Entry
LQG66_23405 CDS
T10106
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
boy Bradyrhizobium ontarionense
Pathway
boy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQG66_23405 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boy03019
]
LQG66_23405 (pnp)
03016 Transfer RNA biogenesis [BR:
boy03016
]
LQG66_23405 (pnp)
Enzymes [BR:
boy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LQG66_23405 (pnp)
Messenger RNA biogenesis [BR:
boy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LQG66_23405 (pnp)
Transfer RNA biogenesis [BR:
boy03016
]
Prokaryotic type
tRNA degradation factors
LQG66_23405 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
DUF5813
Tricorn_2nd
aRib
Motif
Other DBs
NCBI-ProteinID:
UFZ02234
UniProt:
A0ABY3R5F2
LinkDB
All DBs
Position
complement(5288584..5290746)
Genome browser
AA seq
720 aa
AA seq
DB search
MFTKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDAWRNETQVIVTVLSH
DMENDPDIVALVAASAALTLSGVPFKGPIGAARVGFANDEYILNPTLDEMADTQLDLVVA
GTSDAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIDLAEKAAKEPRDVAVIDNGA
IEKEMLGVAEQDLRKAYAIPVKQERYAAVGAVKEKVMAHFFPEGAEPKYDKLRLSGVFKE
LEAKIVRWNILDTGKRIDGRDAKTVRNIVCEVGVLPRAHGSALFTRGETQALVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEVTESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTESGITSLQMDIKIEGITEEIMRVALGQAREGRIHILGEMSK
ALTAARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
NDGEAMKAAIKWIKSIASDPEIGQIYDGTVVKVMEFGAFVNFFGTRDGLVHISQLADKRV
QKTTDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKADGGAETPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccaagcattccgtcgagatcgactggggtggacgtcccctcaagctggaaacc
ggcaagatcgcgcgccaggctgacggcgccgtcgtcgccacctatggcgagaccgtcgtg
ctcgcgactgtcgtcgccgccaagtcgccgcgcgagggcgtcgacttcctgccgctgact
gtcgactatcaggaaaagacctacgctgccggccgcatccccggcggctatttcaagcgc
gagggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgcccgatccgc
ccgctgttcgtcgatgcctggcgcaatgagacccaggtcatcgtgaccgtgctgtcgcac
gacatggagaacgatcccgatatcgtggcgctggtcgccgcgtcggccgcgctgacgctg
tcgggcgtgccgttcaagggcccgatcggcgcggcccgcgtcggcttcgccaatgacgaa
tacatcctcaatccgaccctcgacgagatggccgacacccagctcgacctcgtcgtcgcc
ggcacctccgacgccgtgctgatggtggaatcggaggccaaggagctcaacgaggacatc
atgctcggcgcggtgatgttcggtcaccgccacttccagccggtgatcaacgcgatcatc
gatctggccgagaaggccgccaaggagccgcgcgacgtcgctgtcatcgacaacggcgca
atcgagaaggaaatgctgggcgtcgccgagcaggacctgcgcaaggcctatgcgatcccg
gtcaagcaggagcgctatgccgccgtcggcgccgtcaaggaaaaggtgatggcgcacttc
ttcccggaaggcgccgagccgaaatacgacaagctccgcctctccggcgtgttcaaggag
ctggaagccaagatcgttcgctggaacatcctggacaccggcaagcgcatcgacggccgc
gacgccaagaccgtgcgcaacatcgtctgtgaggtcggcgtgctgccgcgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgctggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtcgggaacctacaaagagacgttcctgctgcac
tacaacttccctccctactcggtcggtgagaccggtcgtctcggcggcaccaagcgccgc
gagatcggccacggcaagctggcctggcgcgcgatccatcccgtgctgccgccgcaccac
gagttcccctacaccacgcgcgtggtgtcggaggtgaccgagtcgaacggctcgtcgtcg
atggcctcggtctgcggcgcctcgctggcgctgatggatgccggcgtgccgttgaagcgt
ccgaccgcgggcatcgcgatgggcctgatcctcgaggacaagcgcttcgccgttctctcc
gacatcctcggcgacgaggaccatctcggcgatatggacttcaaggtcgccggcaccgag
agcggcatcacctcgctgcagatggacatcaagatcgagggcatcaccgaggagatcatg
cgggttgcgctgggccaggcccgcgaaggccgcatccacatcctgggtgagatgtccaag
gcgctgaccgcagcccgcgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaatatcgaggacgacggcaccgtgaaggttgcctcc
aacgacggcgaggcgatgaaggccgccatcaagtggatcaagtcgatcgcctccgatccg
gagatcggccagatctatgacggcactgtcgtcaaggtgatggagttcggcgcgttcgtg
aacttcttcggcacgcgcgacggtctcgtccacatctcgcagctcgccgacaagcgcgtg
cagaagaccaccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccggctgtcgatgaaggccgtcgaccagaccaccggcgaggac
ctcgaagccaagcagaaggccgacggcggcgccgagacgccgcgcgaagccgccggcgaa
tag
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