Bradyrhizobium ontarionense: LQG66_31080
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Entry
LQG66_31080 CDS
T10106
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
boy Bradyrhizobium ontarionense
Pathway
boy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LQG66_31080 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boy03400
]
LQG66_31080 (uvrB)
DNA repair and recombination proteins [BR:
boy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQG66_31080 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LQG66_31080 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_16
AAA_22
Microtub_bd
SWI2_SNF2
DUF87
Motif
Other DBs
NCBI-ProteinID:
UFZ03615
UniProt:
A0ABY3R9M5
LinkDB
All DBs
Position
complement(7099339..7102725)
Genome browser
AA seq
1128 aa
AA seq
DB search
MAKTPETPKKPGRTPKSKAHRPDVQPIGPALAELLNPAINRGESGIGSSTGLKPPPDNSW
DRRAGGEAAAHRARASTKGKSEDAAKRDASGRPMPLRPNPQPVEGRSISDDASRGFPPPN
PPPQAGEGSRRREPGAAASNDHETAPLASPPPPAGEGQGGGLSPPHRPLMEDDANTHPGL
AEAPQANYGTTATIPTLDPDLARQLGLPTAEDDDEALARPPRSKMEALGVKATAEALEAL
IRDGRPEFRRDDGSLQVWTPHRPPRPEKSEGGVRFEIKSAYEPRGDQPQAIAELVEGIAR
NDRTQVLLGVTGSGKTYTMAKVIEATQRPAIILAPNKTLAAQLYGEFKSFFPDNAVEYFV
SYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGS
VETYTAMTFALKKGERIDQRQLIADLVALQYKRTQHDFTRGTFRVRGDVIDIFPAHYEDR
AWRVNLFGDTVENIEEFDPLTGHKQDELEFIKVYANSHYVTPRPTLVQAMKSIKSELKMR
LDQLHAQGRLLEAQRLEQRTTFDIEMMEATGSCAGIENYSRYLTGRRPGEPPPTLFEYVP
DNALVFADESHVTVPQIGGMFRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQTV
AVSATPSGWEINEAGGVFVEQVIRPTGLIDPPVNIRPARTQVDDLLGEVRATAQAGYRSL
ITVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGL
DIPECALVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQMTGSMERAIAETNR
RREKQVEYNTAHGITPESVKKSIGDILNSVYERDHVLVETGSGTATDDAISIGHNFEAVL
ADLETRMREAAADLNFEEAARLRDEVKRLRATELAVVDDPTAKQRTVQGKAGAYAGAKKY
GDAANLPTTALKGRGGSRGGGASSPSSGGGGSAAQGSRGGAKPRDRDPLAPLLDELTGGS
SRRADGPSSPSPRSSRGRDERSSPLEGRGEGRPMGSPSGSKVHKPHLDEMHGPESLPYRP
NPKLPEKPFGGSSKIIQPTNSRESGPEFGPAPRSTGGQPGKRGGWKKR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccccagagacccccaaaaagcccggccgcaccccgaaatcgaaagcccac
cggcccgacgtgcagccgatcgggccggcgctcgccgagctgctcaatcccgccatcaac
cgcggcgagagcggcatcggttcctcgaccggactgaagcccccgccggataattcatgg
gaccgccgcgccggcggcgaagcggccgcgcatcgcgcgcgcgcgtcgaccaagggcaag
agcgaggatgcggcgaagcgggatgcgtcgggtcgtccgatgccactccggccgaatccg
cagccggttgaagggcgttccatatcagacgacgcgtcgcgcggctttcccccacccaac
cctcccccgcaagcgggggagggctccaggcggcgagagccgggcgccgcggcaagcaat
gatcacgagaccgcgccgcttgcgtcccctcccccgcctgcgggggagggccagggtggg
ggcctctctcctccccaccggcccctcatggaggatgacgccaacacccaccccggcctc
gccgaagccccgcaggccaactacggcacgacagccaccatccccacgctcgatcccgat
ctggcgcggcagctcggcctgcccacggccgaggatgacgacgaagcgctggcacggccg
ccgcgcagcaagatggaggcgctcggcgtcaaggccaccgcggaagcgctggaggcgctg
atccgcgacggccgccccgagttccgcagggacgacggctcgctccaggtctggacgcca
caccggccgccacgcccggagaagagcgagggcggcgtccgcttcgagatcaagtcggcc
tatgagccgaggggcgaccagccgcaggcgatcgcggagctggtcgaaggcatcgcgcgc
aacgaccgcacgcaggtgctgctcggcgtcaccggctccggcaagacctacaccatggcc
aaggtgatcgaggcgacgcagcgtccggccatcatcctggcgccgaacaagaccctggcc
gcgcaactctatggcgagttcaagagcttcttccccgacaacgcggtcgagtacttcgtc
tcctattacgactactaccagccggaggcctacgtcccccgcaccgacacctatatcgag
aaggattcctcgatcaacgagcagatcgaccgcatgcgccactcggcgacgcgcgcgctg
ctggaacgcgacgacgtcatcatcgtcgcctcggtgtcctgcatctacggtatcggctcg
gtcgaaacctacaccgcgatgactttcgcgctgaagaagggcgagcgcatcgaccagcgt
cagctgatcgccgatctcgtcgcgctgcagtacaagcgcacccagcacgactttacccgc
ggcacctttcgtgtgcggggcgacgtcatcgacatcttcccggcgcactacgaggaccgc
gcctggcgcgtgaacctgttcggcgacaccgtggagaacatcgaggagttcgatccgctc
accggccacaagcaggacgagctggaattcatcaaggtctacgccaattcgcactatgtg
acgccgcgcccgaccctggtgcaggcgatgaagtcgatcaagtccgagctgaagatgcgg
ctcgaccagctgcatgcgcaagggcgcctgctcgaagcgcagcggctggagcagcgcacc
accttcgacatcgagatgatggaggccacgggaagctgcgccggcatcgagaactactcg
cgctatctcaccggacgccgccccggcgagccgccgccgaccctgttcgaatacgtcccc
gacaacgcgctggtgttcgccgacgagagccacgtcacggtgccacagatcggcggcatg
ttccgcggcgacttccgccgcaaggcgaccttggccgaatacggcttccggctgccctcc
tgcatggacaaccgcccgctgcggttcgaggagtgggacatgatgcggccgcagacggtc
gcggtgtcggcgacccccagcggctgggagatcaacgaggccggcggcgtgttcgtcgag
caggtcatccgtccgaccggcctgattgatccccccgtgaacattcgccccgcccgcacc
caggtcgatgatctcctcggcgaggtccgcgccacggcgcaggccggctaccgctcgctg
atcacggtgctgaccaagcgcatggccgaggatctcaccgaatatctgcatgagcagggc
atccgcgtccgctacatgcattcggacatcgacaccatcgagcgcatcgagatcatccgc
gatctccgcctcggcgcgttcgacgcgctggtcggcatcaacctgctgcgcgagggcctc
gacattcccgaatgcgcgctggtcgccatcctcgacgccgacaaggaaggctttttgcgc
agtgaaacgtcactcattcagaccatcggccgcgccgcgcgcaacgtcgacggcaaggtg
atcctctatgccgatcagatgaccggctcgatggagcgcgccatcgccgagaccaaccgc
cgtcgcgagaagcaggtcgagtacaacacggcccacggcatcacgccggagagcgtcaag
aagtcgatcggcgacatcctcaactcggtctacgagcgcgaccacgtgctggtcgagacc
ggcagcggcaccgccaccgacgacgccatctcgatcgggcacaatttcgaggccgtgctg
gccgatctcgaaacccgcatgcgcgaggccgcagccgacctgaacttcgaggaagccgcc
cgcctgcgcgacgaggtcaagcgcctgcgcgccaccgagctcgccgtcgtcgacgatccc
accgccaagcagcgcaccgtacagggcaaggccggcgcctacgccggcgccaagaaatac
ggcgacgccgccaatctgccgacgacagcgttgaagggccgcggcggctcgcgcggcggc
ggtgcttcttcaccctcctctggagggggagggtcggccgcccaaggcagccgcggaggg
gcgaagccgcgcgacagagaccccctcgcgccactcctcgacgagctcacgggcggctct
tcacgccgcgcggacggtccctcctccccctctccccgttcttcacgggggcgggacgag
cgaagctcgcccttggagggtcggggtgaggggcgccccatgggcagtccctccggctcc
aaagtccacaagccgcatctcgacgagatgcacggcccggagtccctgccctaccgcccc
aaccccaagctgcccgaaaagccattcggcggcagcagcaagatcatccagccgaccaac
tcgcgcgaatcaggccccgaattcggccccgccccacgctcgaccggcgggcagccaggc
aagcggggcgggtggaagaagcggtga
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