Orrella marina: DBV39_05420
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Entry
DBV39_05420 CDS
T05532
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
boz
Orrella marina
Pathway
boz03030
DNA replication
boz03430
Mismatch repair
boz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBV39_05420 (holB)
03430 Mismatch repair
DBV39_05420 (holB)
03440 Homologous recombination
DBV39_05420 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boz03032
]
DBV39_05420 (holB)
03400 DNA repair and recombination proteins [BR:
boz03400
]
DBV39_05420 (holB)
Enzymes [BR:
boz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBV39_05420 (holB)
DNA replication proteins [BR:
boz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBV39_05420 (holB)
DNA repair and recombination proteins [BR:
boz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBV39_05420 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
APP1_cat
Motif
Other DBs
NCBI-ProteinID:
AWB33240
UniProt:
A0A2R4XHH2
LinkDB
All DBs
Position
1218467..1219528
Genome browser
AA seq
353 aa
AA seq
DB search
MAGAHDLTAAIPAFLPWQVDIATPWIKRGDKLAHAWLIHGQTGIGKRQFGLALATSLLCE
QPVDHLACGQCQACLWVRLGNHPDLMRVRPEAQELEEGIYQRTEADSAAASRSNSARPSE
IIKVEQIRLLEPWYHRTTHRAGWRIVLLYPAESMMAESANALLKALEEPPESTLFLLISD
SPDRLLPTILSRCQKMKLPLPDAAASTAWLTQQGLKDSEQWLAVAGGAPLRALELSQNQP
EPYAGWLGQMVRDMAQQNAVPVTEIAENLSKEPAYRWLADLQRLCIDVSLTCAGLKPRYF
VGLETELGRLGRQRTLTQWTAIEHWITSQIPLGHHPLNAKLFAQACLQKVVTV
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggagcgcacgacttgaccgccgcaattcccgcgttcctgccgtggcaggtcgac
attgcaacgccctggatcaagcgaggcgacaagcttgcgcacgcctggctcatacacggc
cagacgggtattggaaagcggcagttcggtctcgcgctggcaaccagtctgctttgcgaa
caacctgtcgaccacctggcttgcggccagtgccaggcttgcctgtgggtcagactgggc
aaccatccagatctgatgcgcgtcagaccagaggctcaggagcttgaagaagggatttat
caaagaacagaagcagacagcgctgcggcaagccgtagcaatagcgccaggccatcggag
atcatcaaggttgagcaaatccgcttactcgagccgtggtatcaccgaaccacgcaccgg
gctggctggcggatcgtgttgttgtatcctgccgaaagcatgatggcagaaagtgccaac
gcacttctcaaagcacttgaagaacccccggaaagtacgttgtttttattgatatctgac
tcaccagatcgacttttgccgacaattctttccaggtgtcagaagatgaaactgccactc
ccggacgctgctgcatccactgcctggctgacacagcaaggtctcaaggattcggagcag
tggctggccgtcgccggtggcgccccgttgagagcactcgagctatcgcagaatcaaccc
gaaccctatgccgggtggctgggacagatggtgcgggacatggcgcagcaaaatgcagtt
cctgtcacagaaattgccgagaatctcagcaaagagcccgcctatcgctggctggccgat
ctgcagcgactatgcatagacgtctcactcacctgtgctggtctgaaaccgcggtatttt
gtcgggcttgaaacagagcttggcagacttggccggcagcgcaccctgactcaatggaca
gcgatcgagcactggatcaccagccagatcccgctgggccaccatccgttaaacgccaaa
ctattcgcgcaggcatgtctgcaaaaagtagtgacagtctga
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