Orrella marina: DBV39_10325
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Entry
DBV39_10325 CDS
T05532
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
boz
Orrella marina
Brite
KEGG Orthology (KO) [BR:
boz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boz03032
]
DBV39_10325
03036 Chromosome and associated proteins [BR:
boz03036
]
DBV39_10325
03400 DNA repair and recombination proteins [BR:
boz03400
]
DBV39_10325
DNA replication proteins [BR:
boz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DBV39_10325
Chromosome and associated proteins [BR:
boz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DBV39_10325
DNA repair and recombination proteins [BR:
boz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DBV39_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
VWA_3
HU-CCDC81_euk_1
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
AWB35758
UniProt:
A0A2R4XPS1
LinkDB
All DBs
Position
complement(2268622..2268912)
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AA seq
96 aa
AA seq
DB search
MTKSELITALAESHPQLSAADADIAVKTIIDAMVRSLANGQRIEIRGFGSFSLSERAPRV
GRNPKTGEQVLVPGKKVPHFKAGKQLREQVDSSLQR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaatcggaactgatcacggcactcgcggagagtcatccacaactctccgcggca
gatgccgacatcgctgtcaagacgatcatcgatgcgatggttcgttcgctcgcgaatggg
caacgtatcgagattcggggttttgggagtttttccctctcggagcgcgctccgagagtt
ggacgtaatcccaagacaggcgagcaggtattggtgccaggtaaaaaagtgccgcacttc
aaggcgggtaagcagttgcgcgagcaggtagatagttcgcttcagcgctga
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