Orrella marina: DBV39_13005
Help
Entry
DBV39_13005 CDS
T05532
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
boz
Orrella marina
Pathway
boz00730
Thiamine metabolism
boz01100
Metabolic pathways
boz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
boz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DBV39_13005
Enzymes [BR:
boz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DBV39_13005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF1400
Motif
Other DBs
NCBI-ProteinID:
AWB34476
UniProt:
A0A2R4XKZ7
LinkDB
All DBs
Position
2868849..2870762
Genome browser
AA seq
637 aa
AA seq
DB search
MNANPKFLAATAQVDSAAVAPLPKSRKVYETGSRPDIRVPFREVDQSDTSTSFGGEKNPP
LTIYDTSGPYTDPQAEIDIRKGLPAIRKAWIEERNDTQVLSGPTSHYGQERLTDPLLSAM
RFDLQRPPRRARSGHNVTQMHYARQGIITPEMEFVAIRENQRLEHYIEALRASSPIGDKL
VQRLLRQHPGQSFGASIPAKVTPEFVRDEVARGRAIIPANINHPESEPMAIGRNFLVKIN
ANIGNSAVSSGIAEEVEKMTWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIY
QALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLPFIPMTAERLTGIVSRGGS
IMAKWCLAHHRESFLYEHFEDICDIMKAYDVAFSLGDGLRPGSTYDANDEAQFAELKTLG
ELTKIAWKHDVQVMIEGPGHVPMHMIKENMELQLEHCDEAPFYTLGPLTTDIAPGYDHIT
SGIGAALIGWYGTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAAIRD
NALSKARFEFRWEDQFNLGLDPDTAKEFHDETLPKDSMKVAHFCSMCGPHFCSMKITQDV
REYAEKLGVDEAAALQKGMQEKAVEFVSKGSQLYQKT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatccaaaatttctcgctgcaaccgctcaggttgacagtgctgccgttgca
cctctgcccaagtcacgcaaagtctacgaaacaggatcacgcccggacatccgtgtcccg
ttccgggaggtcgatcaatcagatacctcgacatcatttggtggtgaaaaaaaccctcca
ttgacgatttatgacaccagtggcccgtatacggatccccaggctgaaatcgacattcgg
aagggattgcctgcgattcgcaaagcatggatcgaggagcgcaacgacacccaggttctg
tctggcccgaccagccattacggtcaagagcgtctgacagaccccttgctctcggccatg
cgctttgacctgcaacgtccaccccggcgtgcccgaagcggtcacaacgtgacccagatg
cactatgcccgtcaaggcatcatcacccctgagatggagttcgtggccatccgtgagaac
cagcgtcttgagcactacatcgaggcgctgcgcgcaagcagtccgatcggtgacaagctg
gttcagcggttgctgcgccagcacccgggtcagtcttttggcgcgtccatccccgccaag
gtcacgcccgagtttgtgcgtgacgaggttgcccgcggcagggcgatcatcccggccaac
ataaaccaccccgaatcagagccaatggccatcgggcgaaattttctggtaaaaatcaac
gccaatattggcaactcggccgtcagttccgggattgccgaagaggtggaaaagatgacc
tggtccattcgctggggtggcgatacagtcatggatctttccacaggcaaacacattcat
gaaacccgtgagtggatcatccgcaactcacctgtaccgatcggaacggtgccgatctac
caggcactcgagaaggtcaacggcaaagcggaagacctgacctgggagatcttccgtgac
accctgatcgaacaggccgaacagggagtggattatttcacgatccacgccggcgtcaga
ctgccgttcatcccgatgaccgcagagcgactgaccggcattgtgtcgcgtggcggttca
atcatggccaaatggtgtctggctcatcaccgggaaagtttcctctacgagcatttcgag
gacatctgcgacatcatgaaagcctacgacgttgcattctcgctcggcgacggactgcgt
cccgggtccacctatgacgccaacgacgaagcccagtttgctgagctcaagacgctaggt
gagctgaccaagattgcgtggaagcacgacgtacaggtcatgattgagggtccgggtcat
gtgcccatgcacatgatcaaggagaacatggagttgcaactcgagcactgcgacgaggca
ccgttctacacgctgggccccctgacaaccgacattgcgcccggctatgaccacattacc
tccggcatcggtgccgcactgatcggctggtatggcactgcaatgctctgctatgtaacg
cccaaggagcacctgggcctgccaaacaagaaggacgtcaaggacggcatcatcacctac
aagattgctgcccatgctgcggatctcgccaaaggacaccccggggccgccatccgggac
aatgcgctatcgaaggcccgattcgagttccgctgggaagaccagttcaatctgggactg
gacccggacacggccaaagagtttcatgatgaaacgctgcccaaagactccatgaaagtg
gcgcacttctgctccatgtgcggcccacacttctgctccatgaaaatcacccaggatgtc
agagagtatgcagagaaactgggagtcgacgaagccgcggccttgcagaaaggtatgcag
gaaaaagccgtggaatttgtctcaaagggttcacagctttaccagaagacctga
DBGET
integrated database retrieval system
