Bordetella parapertussis 12822: BPP0432
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Entry
BPP0432 CDS
T00140
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpa
Bordetella parapertussis 12822
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpa03016
]
BPP0432
Enzymes [BR:
bpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BPP0432
Transfer RNA biogenesis [BR:
bpa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BPP0432
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
CAE36016
UniProt:
Q7WC95
LinkDB
All DBs
Position
complement(454659..455246)
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AA seq
195 aa
AA seq
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MLRSSRASNDNARMAHPPTEAAIAPPRLFFALWPDPATAARLADWAAHAQLAYGGRVMRT
DTLHLTLAFLGAATPAQAAELCAATAARRIAPATLALARYGLFARQRIVWAGPQQADAAL
AALHDDLWTWLRALGWPAPQQGFQPHVTLLRNVDAHAAAPAPPPPVAWRYDHYALVQSQP
QHGRASYRVLARTAA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcggtccagccgcgcttcgaacgataatgcccgcatggcccacccacccaccgaa
gcggcgatcgcgccgccccgcctgttcttcgccctgtggccggaccccgccacggcggcc
cggctggcggattgggcggcgcacgcgcagctggcatacggcggacgcgtcatgcgcacc
gataccctgcacctgacgctggcgttcctgggcgcggccacgcccgcccaggccgccgag
ctgtgcgccgccaccgcggcacggcgcatcgcgccggccaccctggcgctggcccgctat
ggcctgttcgcccgccaacgcatcgtctgggccggcccgcagcaggccgacgccgcgctg
gcggcgctgcacgacgacttgtggacgtggctgcgcgccctgggctggcccgcgccgcag
cagggtttccagccgcatgtcacgctgctgcgcaatgtggacgcccatgccgccgcgccc
gcgccgccgccgcccgtggcgtggcgctacgaccactacgcgctggtgcagtcgcagccg
cagcacggacgggccagctaccgggtgctggcgcgcacggcagcctag
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