Bordetella parapertussis 12822: BPP1221
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Entry
BPP1221 CDS
T00140
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit Tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa03030
DNA replication
bpa03430
Mismatch repair
bpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPP1221 (dnaX)
03430 Mismatch repair
BPP1221 (dnaX)
03440 Homologous recombination
BPP1221 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpa03032
]
BPP1221 (dnaX)
03400 DNA repair and recombination proteins [BR:
bpa03400
]
BPP1221 (dnaX)
Enzymes [BR:
bpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPP1221 (dnaX)
DNA replication proteins [BR:
bpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPP1221 (dnaX)
DNA repair and recombination proteins [BR:
bpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPP1221 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_16
DNA_pol3_tau_5
AAA_14
AAA_18
AAA_2
AAA_5
TsaE
AAA_30
nSTAND3
DSRM_2
PIF1
AAA_28
AAA_19
Rad17
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAE36523
UniProt:
Q7WAY9
LinkDB
All DBs
Position
1301628..1303754
Genome browser
AA seq
708 aa
AA seq
DB search
MTYLVLARKWRPRSFDTLIGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCENGITSKPCGQCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
DAIVGHLQAVLGEEQIGFEVPALRLIGQAAGGSMRDALSLTDQAIAYSAGNLSEEAVRGM
LGTIDQRHLVRLLDALASGDAAGVLAVADELAVRGLSYAGALADLAVLLSRVAIEQRVRG
ALPQDDPLTEDITRLAAALHPDAVQLFYSVAVHSRGELTLSPDEYAGFVMACLRMLALNG
EAGPATAVQAPRADTTPRAAAPAAAAPAETRPEPTPALAPQAAAAPRAVARSESKPQPAP
EPEPEPEPEPEPEPEPEPEPEPEPASRPAATPVAATPPAVAEPEPVAAPTVQARAAEPAP
VPPWEDLPEAVAAPAPAQPAAAPAPVVADDDGPPAWVDEAIPDEAGGGFAPEHSFTADPD
DEFETLAPAPAAMPAPRAPTPRRESGGRGRAARSRLADMSPAGWPELVARLPVTGLAAEL
ARQSEWAGVQGDAVLLRVAVRTLAESESRVRLQTVLCEHFGQGLRLEIEVGVTGDGTAHA
VAQIERAARQQAAEDAVAVDPFVQALVADFGGRVVPGSIRHVDNPPAA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacttatctggtactggcccgcaagtggcgcccgcgatccttcgataccctgatcggg
caggatcacgtggtgcgcgccctcacgcacgcgctggacacgcagcgcctgcatcatgcc
tggctgttcaccggtacgcgcggggtcggcaagaccaccctgtcgcgcatcctggccaag
tcgctcaattgcgagaacggcatcacgtccaagccttgcggccaatgccgcgcctgcacc
gaaatcgatgcgggccgcttcgtcgactacctcgagctcgatgccgcctccaaccgcggc
gtcgaggaaatgacccagctgctcgagcaggcggtctacgcgccgggggctggccgcttc
aaggtctacatgatcgacgaagtgcacatgctgaccgggcatgccttcaacgccatgctc
aagacgctggaagagccgccgccgcacgtcaagttcatcctggcgaccaccgacccgcag
aaaatcccggtcacggtgttgtcgcgctgcctgcagttcaatctcaagcagatgccgccc
gatgcgatcgtggggcatctgcaggcggtgctgggcgaagagcagatcggcttcgaagtg
ccggcgctgcgcctgatcggccaggcggccggcggttccatgcgcgacgcgctgtcgctg
accgaccaggccattgcctatagcgccggcaacctcagcgaagaagcggtgcgcggcatg
ctgggcacgatcgaccagcgccatctggtacgcctgctggatgcgctggcctcgggcgac
gccgccggggtgctggcggtggccgatgagctggcggtgcgcggcctgtcgtatgccggc
gcgctggccgacctggcggtgctgttgtcgcgggtggccatcgagcagcgcgtgcgcggc
gccttgccgcaggacgatccgctgaccgaggacattacgcgcctggccgccgccctgcat
cccgatgcggtgcagctgttctattcggtggccgtgcacagccgtggcgagctgacgctg
tcgcccgacgagtacgccggtttcgtgatggcctgcctgcgcatgctggcgctcaatggc
gaggccggcccggcaacggccgtgcaggcgccgcgcgccgacacgacgccgcgggccgcg
gcgcccgccgcggcggcgccggccgaaacccggcccgaaccaacgcctgcgcttgcgccg
caggccgccgcggccccgcgcgccgtagcccgatccgaatcaaagccgcagcccgcgccc
gagcctgaacccgagcctgaacccgagcctgaacccgagcctgaacccgagcctgaaccc
gagcctgagccagcgtcccggcccgcggccacgccggttgcggcgacgccgccggctgtc
gccgaacccgaacccgtggcggcgccgacggtccaggcccgcgccgccgagcccgcgcca
gtgccgccctgggaggacctgcccgaggccgtggccgcccccgcgccggcccagcccgcg
gccgcgccggcgccggtcgtggcggacgacgacggtccgccggcctgggtcgacgaggcc
attcccgacgaggctggcggcggcttcgcgcccgagcacagcttcaccgccgatccggac
gacgaattcgaaacgctggcgcccgcgcccgcggccatgccggcgccacgggcgccgacg
ccacgccgcgaatccggcggccgtggccgcgcggcgcggtcgcgccttgcggacatgtcg
ccggccggctggcccgagctggttgcgcgcttgccggtcaccggccttgccgccgaactg
gcgcgccagagcgagtgggccggcgtgcagggcgacgcggtgttgttgcgcgtggccgtg
cgcacgctggccgaaagcgaaagccgcgtgcgcctgcagactgtgctgtgcgaacatttc
ggccagggcctgcggctggagatcgaagttggcgtcaccggagacggcaccgcgcatgcg
gtggcccagatcgaacgcgcggcgcgccagcaggccgccgaagacgcggtggcggtcgat
cccttcgtgcaggcgctggtcgccgatttcggcggccgcgtcgtgcccggctcgatccgc
catgtagacaatccgccggccgcctga
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