Bordetella parapertussis 12822: BPP1705
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Entry
BPP1705 CDS
T00140
Name
(GenBank) putative ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
bpa
Bordetella parapertussis 12822
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpa03019
]
BPP1705
Enzymes [BR:
bpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BPP1705
Messenger RNA biogenesis [BR:
bpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BPP1705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
T2SSE
NACHT
nSTAND_NTPase5
nSTAND3
AAA_25
SLFN-g3_helicase
ResIII
TsaE
PhoH
SRP54
Motif
Other DBs
NCBI-ProteinID:
CAE37006
UniProt:
Q7W9Q0
LinkDB
All DBs
Position
1815082..1818993
Genome browser
AA seq
1303 aa
AA seq
DB search
MPGSTDISSMPEASRPPERAAAARSEPRPERPIPAISYPEDLPVSARRQEIARAIAAHQV
VIVSGETGSGKTTQLPKICLELGRGRRKMIGHTQPRRLAATSVAKRIAEELRTPMGEVVG
YQVRFNDRTGPNASIKLMTDGILLAESQRDPLLRRYDTIIIDEAHERSLNIDFLLGYLKQ
LLPRRPDLKVIITSATIDAERFARHFAAGPERPAPVIEVSGRLYPVEVRYRPVQPPMSDE
AAAAPAKGGRERSAGDEERDLIDAIVDAVDECARHGPGDVLVFLPGEREIRESAEALRKR
HPVGTEVLPLYARLSQAEQEQIFHPSGNARRVVLATNVAETSLTVPGIRFVVDSGLARVK
RYSWRNKVEQLRIEPVSRASANQRAGRCGRIGPGLCIRLYDETDFNARAPFTDPEVLRSS
LASVILRMKSLKLDDIEQFPFVEAPPGRAVADGYHLLQELGAIELAGDGEAAEAGGGGAA
FRLTRTGQELAKLPVDPRIGRMILAAREQQCLAEMLIIAAALSVQDPRDRPMAEREAAES
AHAKFADDKSEFLSFLKLWRWYGEQVQHKASQRKLVALLRQNFLSPVRLREWHDVHTQLA
ALVGEQGWRLNQSEATYEQLHMALLSGLLGNIGFKGEEGGQYHGAREIRFHIHPGSRLVK
KAGRWIVAAELVETTRLYARCVARIEPVWLERAAAHLLRRNWSDPRWEKKAGQVVANERA
TLYGLLVYNGRRVHYGRINPQHARELFIRQALVPGEIDTRLPFVAHNRKLIAGIEKLEHQ
TRRPDILVDDELIYAFYDRQLPADISQTASLEKWVNGLDKAAAARLLLTRDELMRHEAAG
VTTDVFPKKVEWQGVAMPLDYHFEPGSPRDGVTLSVPLFALNQLDAQRCEWLVPGMLKEK
AHLLLKSLPQKLRRHCVPLPDYAAGFYERWYERQADPQQGLVDALIADMWDQVQVRPAPG
DFKLETLPAHLFMNFKVVDEHGRMLAAGRNLAQLKAELGKQAQATFQQLAARDSDVAQAL
AHENLTSWSFGPLPEIMEIKRGGQSVIGYPALVDRGAHCDLDVFDDPDEARRHHRAGLLR
LFRLALREQVKFLEKNLADLTKMSMLYMALGTQEELRDQIIDCALAQACLAEPWPVNEQQ
FEARRQEGKGRLGLLAQEVARMAHAILAEYGALQRKLPQARPHAAAYADLQQQLGVLMPK
WFVRDTPYAQLAHYPRYLKAAVARIDKLRADPARDARLMGEMAPILTQYQRARSALKGAP
DPRLDEFRWLLEELRVALFAQELRTPMPVSVKRLMKAWESLRR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgccgggttcaacggatatttcgtcaatgccagaagcctcccgtccgcccgagcgcgcg
gccgccgcgcgctccgagccgcgccccgagcggcccatccccgcgatttcctatcccgaa
gacctgccggtcagcgcgcggcgccaggaaatcgcgcgtgccatcgccgcccaccaggtg
gtcatcgtcagcggcgagacggggtcgggcaagacgacccagctgcccaagatctgcctg
gagctggggcgcggccggcgcaagatgatcggccatacccagccccgccgcctggcggcc
acctcggtggccaagcgcatcgccgaagagctgcgcacgccgatgggcgaagtggtgggg
taccaggtgcgcttcaacgaccgcaccggcccgaacgcctcgatcaagctgatgaccgac
ggcattctgctggccgagtcgcagcgcgatccgctgctgcgccgctacgacaccatcatc
atcgacgaggcgcacgagcgcagcctgaacatcgacttcctgctcggctacctcaagcag
ctgctgccgcgccggcccgacctgaaagtcatcatcacctcggccactatcgacgccgag
cgtttcgcgcggcatttcgccgccggccccgagcgtccggcgcccgtcatcgaggtgtcg
gggcgcctgtatccggtggaagtgcgctaccgcccggtgcagccgcccatgtccgacgaa
gcggccgccgcgcccgccaagggcgggcgtgaacgcagcgccggcgacgaagagcgcgac
ctgatcgacgccatcgtcgacgcggtcgacgagtgcgcgcgccacggtcccggcgacgtg
ctggtgttcctgccgggcgagcgcgaaatccgcgagtcggccgaggcgctgcgcaaacgc
catccggtcggcaccgaagtgctgccgctgtatgcgcggctgtcgcaggccgagcaggaa
cagatcttccacccgagcggcaatgcgcggcgggtggtgctggccaccaacgtggccgaa
acctcgctgaccgtgccgggcatccgcttcgtggtcgacagcgggctggcgcgcgtcaag
cgctactcctggcgcaacaaggtcgaacagttgcgcatcgagccggtcagccgcgcctcg
gccaaccagcgcgccggccgttgcggccggatcggcccgggcctgtgcatccgcctctac
gacgagaccgatttcaacgcccgcgcgccgttcaccgacccggaggtgctgcgttcctcg
ctggcgtcggtgatcctgcgcatgaagtcgctcaagctggacgacatcgagcagtttccg
ttcgtcgaggcgccgccggggcgcgccgtggccgatggctaccacctgctgcaggagctg
ggcgccatcgagctggccggcgacggcgaggccgccgaggcgggcggtggcggcgcggcg
tttcgcctgacccgcaccggccaggagctggccaagctgccggtggacccgcgcatcggc
cgcatgatcctggccgcgcgcgaacagcagtgcctggccgagatgctcatcatcgccgcc
gcattgtcggtgcaggatccgcgcgaccgcccgatggccgagcgcgaggcggccgaaagc
gcgcacgccaagttcgccgacgacaagtccgaattcctgtcgttcctgaagctgtggcgc
tggtatggcgagcaggtgcagcacaaggcatcgcagcgcaagctggtggcgctgctgcgc
cagaacttcctgtcgccggtgcgcctgcgcgaatggcacgacgtgcatacccagttggcc
gcgctggtgggcgagcagggctggcgcctgaaccagagcgaggccacctacgagcagctg
cacatggcgctgctgtcgggcttgctgggcaatatcggtttcaagggcgaagagggcggc
cagtaccacggcgcgcgcgagatccgtttccacatccatcccggctcgcgcctggtcaag
aaggccgggcgctggatcgtcgccgccgaactggtggaaaccacgcgcctttacgcgcgc
tgcgtggcgcgcatcgagccggtatggctggagcgcgccgccgcgcacctgctgcgccgc
aactggtccgacccgcgctgggagaaaaaagccgggcaggtggtcgccaacgagcgcgcc
accctgtatggcctgctggtgtacaacggccggcgggtgcactacggccgcatcaacccg
cagcacgcccgcgaactgttcatccgccaggccctggtgcccggcgagatcgacacccgg
ctgccgttcgtggcgcacaaccgcaagctgatcgccggcatcgagaagctggagcaccaa
acgcgccggcccgacatcctggtcgacgacgagctgatctacgcgttctacgaccgccag
ttgccggccgacatttcgcagaccgccagcctggaaaagtgggtaaacgggctggacaag
gccgccgccgcgcgcctgctgcttacgcgcgacgaactgatgcgccacgaggcggccggc
gtgaccaccgacgtgtttcccaagaaagtcgagtggcagggcgtggcgatgccgctggac
tatcacttcgagccgggctcgccgcgcgacggcgtcacgctgtcggtgcccctgttcgcg
ctcaaccagctcgacgcgcagcgctgcgaatggctggtgccgggcatgctcaaggaaaaa
gcccacctgctgctcaagtcgctgccgcagaagctgcgccgccattgcgtgccgctgccc
gactacgcggcgggcttctacgaacgctggtacgagcgccaggccgacccccagcagggc
ctggtcgatgcgctgatcgccgacatgtgggaccaggtacaggtgcgcccggcgcccggc
gacttcaagctggaaacgctgccggcgcacctgttcatgaacttcaaggtggtcgacgag
catggccggatgctggccgccgggcgcaatctggcgcagctcaaggccgaattgggcaag
caggcccaggcgaccttccagcaactggcggcgcgcgattcggacgtggcgcaagcgctg
gcgcacgaaaacctgacgtcctggtcgttcggccccttgcccgagatcatggagatcaag
cgcggcgggcagtccgtcatcggctacccggcgctggtcgatcggggcgcgcattgcgat
ctcgacgtgttcgacgatcccgacgaggcgcgccgccaccatcgtgccggcctgctgcgg
ctgttccggctggccttgcgcgagcaggtcaagttcctggaaaagaacctggccgacctg
acgaagatgagcatgctgtacatggccctgggcacgcaggaagagctgcgcgaccagatc
atcgattgcgcgctggcgcaggcctgcctggccgagccctggccggtcaatgagcagcag
ttcgaggcgcgccgccaggagggcaagggcaggctgggtttgctggcgcaggaggtggcg
cgcatggcgcacgccatcctggccgaatacggcgccctgcagcgcaagctgccgcaggcc
aggccgcacgcggcggcctacgccgacctgcagcagcaactgggcgtgctgatgccgaaa
tggttcgtgcgcgacacgccttacgcgcagctggcgcactatccgcgctatctcaaggcg
gcggtggcgcgcatcgacaagctgcgcgccgatccggcgcgcgacgcccgcctgatgggc
gagatggcgcccatcctcacccagtaccagcgcgcgcgcagcgcgctcaagggcgcgccc
gatccgcgcctggacgaattccgctggctgctggaagaactgcgggtcgccctgttcgcc
caggaattgcgcacccccatgccggtctcggtcaagcgcctgatgaaggcctgggagtcg
ttgcggcggtag
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