Bordetella parapertussis 12822: BPP1869
Help
Entry
BPP1869 CDS
T00140
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa03030
DNA replication
bpa03410
Base excision repair
bpa03420
Nucleotide excision repair
bpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPP1869 (polA)
03410 Base excision repair
BPP1869 (polA)
03420 Nucleotide excision repair
BPP1869 (polA)
03440 Homologous recombination
BPP1869 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpa03032
]
BPP1869 (polA)
03400 DNA repair and recombination proteins [BR:
bpa03400
]
BPP1869 (polA)
Enzymes [BR:
bpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPP1869 (polA)
DNA replication proteins [BR:
bpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BPP1869 (polA)
DNA repair and recombination proteins [BR:
bpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BPP1869 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPP1869 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WD40_4
Motif
Other DBs
NCBI-ProteinID:
CAE37170
UniProt:
Q7W999
LinkDB
All DBs
Position
1993141..1995855
Genome browser
AA seq
904 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVQDHKAEYAVCVFDA
RGKTFRDDLFPDYKSHRPPMPEDLAAQIEPIHEAVRALGWPLLAIEGVEADDIIGTLARQ
ASAQGIDTIVSTGDKDLAQLVDPHVTLVNTMSGEVLDVAGVNSKFGVPPERIVDYLMLVG
DTVDNVPGVNKVGPKTAVKWLAEHGSIDALVAAADSVKGVAGNNLREAIPNFPLTRTLLT
VKCDCDLTGHVSDWEDLAWRERDAATLTALFDRYGFRTWLRELTGDQERLPTGDARAVPQ
AVAPAELDYRIITDWAAFDAWMALVEDAPLVALDTETTSLDEMQARLVGLSMAVKPGVAC
YIPVAHRGPEAGDQLPRDEVIARLRGWLEDAGRAKLLHHAKYDTHVFANEGVSLAGVAED
TMLQAYVLESHRGVGLNDLAQRFLGRSGVNYEDLCGKGAKQIGFDEVAVPLAGHYSCEDS
DFTLQLHEVLRPRVAEDEGLERTYLLELQVSRVLTVVERNGVKVDAQELGRQSHKLGQEM
LALEQRAYELAGQPFNLNSPKQLGEILFGRMGLPVVRKTAGGAPSTDEEVLSKLAQDYPL
PQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYSQAAVITGRLASSDPNLQNIPVRT
EAGRRVREAFIAEQGKLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATASEVFGV
PLAEVGAEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFTRYPGVARYMDD
TRRLARDQGYVETVFGRRLQLPDIRAASGPRRQGAERAAINAPMQGTAADLIKMAMVAVQ
DWLDAERLRTRMIMQVHDELVLEVPDEELAAVAEALPRLMCDVATLRVPLVAEVGMGTNW
EQAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattgctggtagacggttcgagctacttgtaccgtgctttccacgcc
atgcccgacctgcgcaatgcgcagggcgaacccacgggtgcgctttatggcgtggtcaat
atgttgcgcaagctcgttcaggatcataaggcagagtatgccgtatgcgttttcgatgca
cgcggaaaaacattccgggacgatttgttccctgactacaagtcgcaccgcccgcccatg
ccggaagacctggcggcgcagatcgagccgatccacgaggccgtacgcgccctgggctgg
ccgttgctggccatcgaaggggtggaggcggacgacatcatcggcacgctggcgcggcag
gccagcgcgcaaggcatcgacaccatcgtctccacgggcgacaaggacctggcgcaactg
gtcgacccgcacgtcacgctggtcaacaccatgagcggcgaggtgctcgacgttgccggg
gtgaacagcaagttcggcgtgccgccggagcgcatcgtcgattacctgatgctggtcggc
gacacggtcgacaacgtgcccggcgtgaacaaggtcggacccaagacggccgtcaagtgg
ctggccgaacatggctccatcgacgcgctggtggccgccgccgacagcgtcaagggcgtg
gccggcaacaatctgcgcgaagccattccgaactttccgctcacgcgcacgctgctgacg
gtcaagtgcgactgcgacctgaccggccatgtgtcggactgggaagacctggcatggcgc
gagcgcgacgcggccaccttgaccgcgctgttcgaccgctacggttttcgcacctggctg
cgcgaactgacgggcgaccaggagcgcctgcccacgggggacgcgcgcgccgtgccgcag
gccgtcgcgccggccgagctggactaccgcatcatcaccgactgggccgccttcgatgcc
tggatggcgctggtggaggacgcgccgctggtggcgctggatacggaaaccacgtcgctc
gatgagatgcaggcgcggctggtgggcctgtcgatggcggtcaagccgggcgtggcctgc
tacatcccggtggcgcatcgtggccccgaggcgggcgatcaattgcccagggacgaggtc
atcgcgcgcctgcgcggctggctggaggacgccgggcgcgccaagctgctgcaccatgcc
aaatacgatacccatgtcttcgccaacgaaggcgtaagcctggcgggcgtggccgaggac
acgatgctgcaggcctatgtgctggagtcgcatcgcggcgtgggcctgaacgacctggcc
cagcggtttctcgggcgcagcggcgtgaactacgaagacctgtgcggcaagggcgctaag
cagatcggtttcgacgaggtggcggtccccctggcggggcattattcctgcgaggattcc
gatttcaccctgcagttgcacgaggtgctgcgcccgcgtgtggccgaggacgaagggctg
gagcgcacctacctgctggagctgcaggtctcgcgcgtgctgaccgtggtcgagcgcaac
ggtgtgaaggtcgatgcccaggagctggggcgccagagccacaagctgggccaggaaatg
ctggcgctggagcagcgcgcctacgagctggccggccagccgttcaacctgaactctccc
aagcaattgggcgagatcctgttcggccgcatggggctgccggtcgtgcgcaagaccgcg
ggcggcgccccctcgaccgacgaggaagtgctgtccaagctggcgcaggactatccgctg
ccgcaggtgctgctggaataccggggcctgtccaagctgaagtccacctataccgacaag
ctgccgcgcatgatcaacccggccaccggccgcgttcatacgcactattcgcaggcggcg
gtgatcaccggccggctggcgtcgtcggatcccaacctgcagaacatcccggtgcgcacc
gaggccggccggcgcgtgcgcgaggccttcatcgccgagcagggcaagctgctgtcggcc
gactactcgcagatcgagctgcgcatcatggcgcacgtctcggatgacgccaacctgcag
cgtgccttcgcggcgggcgaggatatccaccgcgcgaccgcctccgaggtgttcggcgtg
ccgctggccgaggtcggcgccgagcagcgccgcgccgccaaggcgatcaatttcggactg
atctacggcatgggcgtgttcgggctggcttccaacctgggcattacgcgcgacgccgcg
caggcctacatcgaccgctatttcacccgctatcccggcgtggcgcgctacatggacgac
acgcgccggctggcgcgcgaccagggctacgtcgagacggtattcggccgcaggctgcag
ctgccggacatccgcgccgcctccgggccgcgccgccagggcgccgagcgggccgccatc
aatgcaccgatgcagggtaccgccgccgacctgatcaagatggccatggtggcggtgcag
gactggctggacgccgagcgcctgcgcacccgcatgatcatgcaggtgcacgacgaactg
gtgctggaggtgcccgacgaggaactggcggcggtcgccgaagcgctgccgcggctgatg
tgcgacgtggccacgctgcgcgtgccgctggtggccgaggtgggcatgggcacgaactgg
gaacaggcgcactga
DBGET
integrated database retrieval system
