Bordetella parapertussis 12822: BPP2025
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Entry
BPP2025 CDS
T00140
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPP2025 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpa03400
]
BPP2025 (uvrB)
DNA repair and recombination proteins [BR:
bpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPP2025 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BPP2025 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
DUF87
AAA_22
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CAE37325
UniProt:
Q7W8V6
A0ABU5WZY1
LinkDB
All DBs
Position
2165493..2167520
Genome browser
AA seq
675 aa
AA seq
DB search
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMAN
MIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRRE
VLARLVAMQYTRNDADFTRGVFRVRGETIDIFPAESPELALRLTLFDDEIESLELFDPLT
GRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMY
RGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQV
VRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVR
VRYLHSDIDTVERVEIIRDLRLGVFDVLVGISLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKA
VRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARD
ALNALKSRLLLDGVG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcctggattcgtcgaattccccgatagcccgtttcacctctatcagccgtac
cctcccgcgggcgaccagccgggagcgatcgacgcgttgaccgagggcgtctcggacggc
ctgatgtttcagacgctgctgggcgtgacgggctcgggcaagacctacaccatggccaac
atgatcgcccgcctgggccgtccggccctggtgcttgcgcccaacaagaccctggccgcc
cagctgtacgccgaaatgcgcgaattcttcccccgcaacgcggtggagtatttcgtgtcg
tactacgactattaccagcccgaagcctacgtgccgacccgcgacctcttcatcgagaag
gattcgtcgatcaacgagcacatcgagcagatgcgcctgtcggccaccaagagcctgctg
gagcgccgcgatacggtcatcgtgggcaccgtctcgtgcatctacggtatcggcaatccg
ggcgactaccatgccatggtcctgatcctgcgcaccggcgaccggatttcccggcgcgag
gtgctggcgcggttggtggcgatgcagtacacccgcaacgacgcggacttcacgcgcggc
gtattccgggtacgcggtgagaccatcgacatcttcccggcggaaagcccggagctcgcg
ctgcgcctgacgctgttcgacgacgaaatcgagtcgctggagctgttcgaccccctgacc
gggcgcgtgaggcagaagctgccgcgctttacggtatacccgggctcgcactacgtgacg
ccgcgcgaaaccgtgctgcgcgcgatcgaaaccatcaaggaagagctgcgcgagcggctg
gcccagctgatcgccgacggcaagctggtggaggcgcagcggctcgagcagcgcacccgc
ttcgatctggaaatgctgcaggagctgggcttttgcaagggcatcgagaactattcgcgg
cacttgtccggcgcggcgccgggcgagccgccgcccaccctgatcgattacctgccggcc
gacgcgctgatgttcatcgacgaaagccacgtcaccatcgggcagctcggcggcatgtac
cgtggcgaccgttcgcgcaaggaaaccctggtgcagtatggcttccggctgccgtcggcg
ctggacaaccggcccctgcgcctggaggagttcgaggcgcgcatgcgccagtgcgtgttc
gtgtcggccacgccggccgcctacgagcaggagcacgccgataacgtggtcgagcaggtg
gtgcggccgaccgggctggtcgatccgatcgtcgaggtgcgtccggcgcacacccaggtc
gacgacctgctgggcgagatccacaagcgggcggcgctgcaggagcgcgtgctggtcacg
acgttgaccaagcgcatggccgaggacctgaccgatttcctgtccgagcacggggtgcgg
gtgcggtacctgcattcggacatcgataccgtcgaacgggtggaaatcatccgcgacctg
cggctgggcgtcttcgacgtgctggtgggcatcagcctgctgcgcgagggcctggatatc
cccgaagtgtcgctggtggccatcctggatgccgacaaggaaggcttcctgcgatccgag
cgcagcctgatacagacgataggccgggccgcccgcaacctgaatggccgggccattctc
tacgccgaccgcataaccgactcgatgcggcgtgccatcgacgagaccgagcggcgcagg
gccaagcagatccagcacaacaccgaccacggcatcaccgcgcgcggggtcagcaaggcc
gtgcgcgaactgatcgacggggtggtggcgccggccggccatgacgcgctggaatccgcc
gtgcccgccgaggtgctgaccgacgaaaaggccatggcgcgcgagatccggcgcctggaa
aagctgatgatggatcacgcccgcaacctggaattcgagcaagccgccgcggcacgcgat
gcgctcaacgctctcaagagtcggttgctgcttgatggtgtaggttag
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integrated database retrieval system
