Bordetella parapertussis 12822: BPP2048
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Entry
BPP2048 CDS
T00140
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa03410
Base excision repair
bpa03430
Mismatch repair
bpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPP2048 (recJ)
03430 Mismatch repair
BPP2048 (recJ)
03440 Homologous recombination
BPP2048 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpa03400
]
BPP2048 (recJ)
DNA repair and recombination proteins [BR:
bpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BPP2048 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BPP2048 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BPP2048 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAE37348
UniProt:
Q7W8T3
LinkDB
All DBs
Position
complement(2187398..2189134)
Genome browser
AA seq
578 aa
AA seq
DB search
MAARAQAQLERLVVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWP
ALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLV
PNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLP
GDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALS
DLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFA
LGPRINAAGRLADMSLGIACLTTDDEAQALEMARELDNINRERRTIEAEMRDQALAAMEA
PDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLR
DALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETD
GSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDA
IWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgcgcccaagcacaactggaacgcctggtggtctcgccccgtctgattatc
cgtactgccgatctgcaagcctgccagcacctcgaagcggccggcatccacccgctgctg
tcgcgcctgtgggcggcgcgcggcgtcatccaccccgagcagacccgcatggcgtggccc
gcgctgctgccgcccgaccgcctgacccactcggcccacgcggccgccgtgctcgccgac
gccatcgagcagggcaagcgcctgctcatcgtggccgactacgactgcgatggcgccacg
gcctgcgcggtcggcctgcgcgccctgtcggccatgggcgccgacgtggatttcctggtt
cccaaccgcttcgagaccggctatggcctctcgccggcggtcgtcgagctggcctgccgc
catcggcgcggcaagcccgacatcatcatcacggtcgacaacggcatcgccagcgtcgac
ggcgtggccgccgccaacgccgccggcatcggcgtggtcatcaccgaccaccacttgccc
ggcgacacgctgcccgaggccctggccatcgtcaatcccaaccagcccggctgcggtttc
ggctctaagcacctggccggcgtcggcgtcatcttctacatgatgctggcgctgcgcgcc
gagctgcgccgccgcggcgtctacgcgccggatggcggcccgcgcctggatgcgctgtcc
gacctggtggccctgggcacggtggccgacgtggtcaagctggacgccaacaaccggctg
ctggtcacgcaggggctgcagcgcatgcgggccggccgcatgcagcccggcgtgcgcgcc
ctgttcgccgtggccgggcgcgagccgcgcaccgccagcggcttcgacctgggctttgcc
ctcggtccgcgcatcaacgccgccggccggctggccgacatgagcctgggcatcgcctgc
ctgaccaccgacgacgaggcgcaggcgctcgaaatggcgcgcgagctcgacaacatcaac
cgcgaacgccgcaccatcgaagccgagatgcgcgaccaggcgctggccgccatggaggcg
cccgacgccgccgccggcgccacggtatgcgtattcgaccccggctggcaccagggcgtg
gtcggcctggtggcctcgcgcctgaaggagaagttctggcgccccacgctggccttcgcc
ccggccggcgaggacgagctgcgcggctcgggccgctcgatccccgacgtgcatttgcgc
gacgcgctcgacctggtgtccaagcgccacccgggcctgatacgcaagttcggcggccac
gccatggccgccggcctgaccctgggcagcggcgatttcgccgccttcgccccggccttc
gacgccgcggtgcgcgagctcaccgggcgcgaccgcttcgagccgctgctcgaaaccgac
ggctcgctcgaaagcggctacgccaatgccgaagtggccggcctgctgcagcagcaggtc
tggggcgcggggttcgccgccccgctgttcctggacgaattcaccgtgcgcagccagcgc
ctggtgggcggcaagcacctgaagctggcgctcgagcgcggccaccagcgcttcgacgcc
atctggttcggccacgaccagtccctgcccgagcgcatccaggccgcctaccggctggag
cagaacatctggaatggcatggtgtcggtacagctggtcatcgagcacgccgcctga
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