Bordetella parapertussis 12822: BPP3357
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Entry
BPP3357 CDS
T00140
Name
(GenBank) bacteriophage-related DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPP3357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpa03400
]
BPP3357
Enzymes [BR:
bpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BPP3357
DNA repair and recombination proteins [BR:
bpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BPP3357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
CAE38642
UniProt:
Q7W5D6
LinkDB
All DBs
Position
complement(3617159..3618055)
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AA seq
298 aa
AA seq
DB search
MSAPEAAVPAAPRPNPLQRIWLREIGIEKTWLPAPLASAAGAAAPAAPVAEAANAAVATA
EAVRPAATTPRADGPAASPARAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGADLGQL
QQLVQDCTACGLCQGRRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLLDAML
QSVGMSRERDVFIANVIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQ
TLLGTEATIGNLRGRVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAARG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcctgaggccgccgtgccggccgcgccgcgtccgaatccgctgcagcggatc
tggctgcgcgagatcggcatcgagaaaacctggctgccggcgccattggcgtccgcggcc
ggggctgccgcgcccgccgcgcctgtcgccgaggccgccaatgcggccgtggcgacggcc
gaggccgtccggccggcggccacgaccccacgcgccgatggcccggcggccagtccggcc
cgcgcgccgcgcccgccggtggccgcgccgcagcgcgccgagccggccgccgaggccgac
ggacaggccgcgcgggccgccgtggcggcgcgggctgccggcgccgacttggggcaattg
cagcagctggtgcaggactgcaccgcctgcggcctgtgccaggggcggcgccacgccgtg
ttcggcatgggcgcccagccagcgcgctggatggtggtgggcgaggcgcccggcgagcag
gaagaccgccaggggctgccattcgtcggccgctcgggaaagctgctggatgcgatgctg
cagtcggtgggcatgagccgcgagcgcgacgtgttcatcgccaacgtcatcaagtgccgc
ccgcccggcaaccgcaatcccaagcccgaggaaatcgccgcctgcagtccctacctgcgg
cgccagattgccctgctgaacccggagcgcatcctggtgctgggccggttcgcggcccag
acgctgctgggcaccgaggccacgataggcaatttgcgcggccgcgtgcacagcctgcaa
accgacgaggggcgctcgattcccgtggtggtcagctaccacccggcctatctgttgcgc
agcccggccgagaaggcgcgcgcctggcaggacctgctgctggcggcgcgcggctga
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