Bordetella parapertussis 12822: BPP4248
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Entry
BPP4248 CDS
T00140
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
bpa
Bordetella parapertussis 12822
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpa03021
]
BPP4248 (rpoH)
Transcription machinery [BR:
bpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPP4248 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_24
HTH_AsnC-type
HTH_PafC
HVO_2718
Sigma70_r4_2
HTH_3
HTH_11
HTH_DeoR
HTH_25
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CAE39527
UniProt:
A0ABU5X5S9
Q7W303
LinkDB
All DBs
Position
complement(4585967..4586890)
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AA seq
307 aa
AA seq
DB search
MPVDNLPLEAANMTQPSSSLALSGNALALAVANPGALGTIDAYISAVNRLPILTAEQEGQ
LARRLRDEGDLEAARELVVSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRFDPE
RGVRLVSFAVHWIKAEIHEFIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLDPEQVDH
IARELNVRREDVSEMEVRLSGRDLSLESQDDDDDSFAPIAYLSDEGRQEPSRVLDRMAHD
DLQGAGLGRALEALDARSRRIIEARWLQDDGGLTLHELAQEFGVSAERVRQIEAAALKKM
RGALTPA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagacaaccttcccctggaggccgcaaacatgactcaacccagtagttcgttg
gccctttccggcaacgccctggcgttggcggtggccaacccgggtgcgcttggcaccatc
gatgcctacatttccgccgtcaaccgcctgcccatcctgaccgccgaacaggaaggccag
ctcgcgcgccgcctgcgcgacgaaggcgacctcgaggccgcgcgcgaactggtcgtgtcg
cacctgcgtctggtggtgtcggtggcgcgccagtacctgggttacggcctgccgcacgcc
gacctgatccaggaaggcaatgtcggcctgatgaaggccgtcaagcgcttcgaccccgag
cgcggggtgcggctggtgtcgttcgccgtgcactggatcaaggccgaaatccacgaattc
atcatccgcaactggcggctggtcaaggtggccaccaccaaggcgcagcgcaagctgttc
ttcaacctgcgcagcatgcgccccgacggccagacgctggatcccgagcaggtcgaccac
atcgcgcgcgagctcaatgtgcgccgcgaggacgtcagcgagatggaagtgcgcctgtcc
gggcgcgacctgtcgctggaaagccaggacgacgatgacgacagtttcgcgccgatcgcc
tatctgtccgatgagggccggcaagagccgagccgcgtgctggaccgcatggcgcacgac
gacctgcagggcgccggcctgggccgggcgctcgaagcgctggacgcgcgttcgcgccgc
atcatcgaggcccgctggctgcaggacgacggcggcctgaccctgcacgaactggcccag
gagttcggcgtatcggccgagcgggtgcgccagatcgaagcagcggcgctgaagaaaatg
cgcggtgcgctgacccccgcctga
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