Brucepastera parasyntrophica: K7I13_02000
Help
Entry
K7I13_02000 CDS
T08309
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bpaa
Brucepastera parasyntrophica
Pathway
bpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7I13_02000 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpaa03019
]
K7I13_02000 (pnp)
03016 Transfer RNA biogenesis [BR:
bpaa03016
]
K7I13_02000 (pnp)
Enzymes [BR:
bpaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K7I13_02000 (pnp)
Messenger RNA biogenesis [BR:
bpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K7I13_02000 (pnp)
Transfer RNA biogenesis [BR:
bpaa03016
]
Prokaryotic type
tRNA degradation factors
K7I13_02000 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KhpA-B_KH
KH_2
Cellsynth_D
BetaGal_dom2
Motif
Other DBs
NCBI-ProteinID:
ULQ60121
LinkDB
All DBs
Position
complement(435238..437343)
Genome browser
AA seq
701 aa
AA seq
DB search
MIHRVTYRIGNDDLILETGRLAKQANGSVFAQYAGTAVLATACASSDSVEGLDYVPLTVD
YNEKYYAAGKIPGGFIKREGRPKDKEILVSRLIDRPMRPLFEKSFGRDIQLIPTCVSSDM
QNPPDIIAVIASSAAVAISDIPFNGPVAAARIGYINGEYIINPTFEQIETADMEIVVAGT
SEGITMVEGGAHEVSEEVMLGALEKAKEFIKAICDLQRELAQKCGKEKLPLSPLTVELQN
RDVIYAEAYPKMEEALYVKGKHERRAACHAVKKQLEETYAEQLEDELQRKLFHALFEDIE
YTILRKNILEKGVRVDGRDPEKIRDISCEIGVLQRPHGSALFTRGETQALAVATLGTIFD
EQIYDDIEGDRREHFILHYNFPPFSVGEVGRMGTGRREIGHGYLARRSLEPVVPSREAFP
YTVRVVSEILESNGSSSMASVCGGTLSLLHAGVPLKSPVAGIAMGLITDGDKYAVLSDIL
GEEDHLGDMDFKVAGTENGITGFQMDIKIAGVSTEIMKNALDQAKRGRLHILGIMNQTIS
KPSEQISQYAPRIEVMKIDTDKIGALIGPGGKTVKALSEQYQVTINTENDGTVTIYGKNS
KAALAARDAIKGIVEDPEVGRIYDGVVRRIMDFGAFVEILPGKEGLVHISKLSRTRVAHV
SDVVKEGQKIPVKLLEIDKMGRLNLSYIDAIGDDAPNPENN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgatacatagagtaacatacagaatcggaaatgatgatctgattcttgaaaccggccgt
cttgcaaagcaggctaacggctcggtatttgcccagtatgcgggaactgcggttcttgca
actgcctgcgcctcttcggatagtgtggaaggcttggattatgttccgcttaccgtggat
tataatgagaaatattatgctgcggggaaaatacccggcggttttattaaacgcgaaggc
cgtccgaaggacaaggaaattcttgtttcccgtctgattgaccgtccgatgcggcctctt
tttgaaaaatctttcggaagggatattcagctcattccgacctgcgtttcttcggatatg
cagaatcctcctgatattattgccgtaatagcaagttcagcagctgtcgccatatcggat
attcctttcaacgggccggtagcggcggcgagaatcgggtatattaatggtgaatatatt
ataaatcccacctttgaacagattgaaactgctgatatggaaatagtggtcgcgggtact
tcagaaggaataaccatggttgagggcggcgcacatgaggtatccgaagaggttatgctc
ggcgcgctcgaaaaagccaaggagtttataaaagctatctgtgatctgcagagggaactt
gcgcagaaatgcggaaaagaaaaactcccgctcagtcccctgactgttgaacttcaaaac
cgtgacgttatctatgccgaagcctatccgaaaatggaagaggccctctatgtcaaagga
aaacatgagaggcgggctgcctgccatgcggtaaaaaaacagcttgaagaaacctatgcg
gaacagcttgaagacgaactgcagcgaaagctctttcatgcgctttttgaagatatagaa
tatactattctccgcaagaatattctggaaaagggcgtccgcgttgacggccgggacccg
gaaaaaattcgcgatataagctgtgaaatcggggttttacagaggccccatggttccgcc
ctgtttacccgcggggaaacacaggctctggctgtagccacgctcgggaccatctttgac
gagcagatttatgatgatattgaaggcgaccgcagagagcattttatcctgcattataat
ttccctccattttcagtcggcgaggtggggcgtatgggtaccggccgccgcgaaatcggt
cacgggtatcttgcaaggcgttcactggaacctgtagttccttcacgggaggcctttccc
tatacagtccgggttgtttctgaaatccttgaatcaaacggttcttcctcaatggcttca
gtctgcggcggaactctttctcttcttcatgccggggtccctctgaaaagtcctgtagca
ggtatcgcaatgggactgattacagatggtgataagtatgcagtgctttcggatatcctc
ggtgaggaagatcatctgggcgacatggattttaaggtcgcaggcaccgaaaacggaatt
accggcttccagatggatattaagattgcgggtgtttcaactgaaatcatgaaaaatgcc
cttgatcaggcaaagcggggacgtttgcatattcttggcataatgaaccagacaatttcc
aaaccgtccgaacagatttcccagtatgcgccccgcatagaggtaatgaaaattgatacc
gataaaatcggcgccctgataggccccggcggcaagaccgttaaggctctttcagaacag
tatcaggtcaccattaatactgaaaatgacgggactgttaccatttacggtaagaattca
aaggccgctcttgctgcccgtgacgctataaagggtattgtggaagaccccgaagtcgga
agaatatatgacggcgttgtccgcagaataatggacttcggcgcttttgtggaaattctc
cccggcaaggaaggattggtccatatttcaaagctttcccggacccgggtcgcccatgtt
tccgatgtggtaaaagagggacagaagatacctgtcaaacttctggaaatagataaaatg
ggcagactgaatctgtcctatatcgatgcgattggagatgatgcccctaacccggaaaat
aattaa
DBGET
integrated database retrieval system
