Brucepastera parasyntrophica: K7I13_04205
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Entry
K7I13_04205 CDS
T08309
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bpaa
Brucepastera parasyntrophica
Pathway
bpaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7I13_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpaa03019
]
K7I13_04205
03400 DNA repair and recombination proteins [BR:
bpaa03400
]
K7I13_04205
Enzymes [BR:
bpaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K7I13_04205
Messenger RNA biogenesis [BR:
bpaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K7I13_04205
DNA repair and recombination proteins [BR:
bpaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K7I13_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ULQ60511
LinkDB
All DBs
Position
872244..873563
Genome browser
AA seq
439 aa
AA seq
DB search
MDFFPGQNFSAEDYCEWAPDDIACPLLSDSGSPEYGETRTSDRISALAESAFGIPYLFPW
QRLVIANILDAIEAVRAAENKDSDDECYDEDGAHRGRQIILLPTGAGKSLCFQLPALVLD
KPTLVIYPLLALMGDQLRRMEENGIRPVLFRGNQNTEERENQYRRLDGRDGQPPANLIIA
NPEILSVEKILKKIAERGVGHIAVDEAHCVSEWGDSFRPAYLDLKKIIEKLNPPAVTAFT
ATASPPVLERIAEILFDGRAHIVRGDSDRPNIQYSVIHCFNKPAALIRAVAGNQRPLVVF
CSTRGQTERTALLLRETLNDTDIRFYHAGLEKEEKQKIESWFHGHERGILCTTCAWGMGV
DKKMSARLFTGIYLPHRKPIFRKQAGADATETGQKPFCSGVKKTGGESKPCLKERNCGQC
LLCAMPNQACAEGKYCLTQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatttttttcccggacagaatttttccgccgaggattattgcgaatgggcgcctgat
gatatagcctgtccgctcttatcggattccggctcgcccgaatacggagaaacccggaca
tccgaccgcatatcggcgctcgcggaaagcgccttcggaatcccctacctgtttccgtgg
cagcggcttgtaatcgcaaatattcttgacgcaatagaggcggtcagggctgctgaaaat
aaagacagcgatgatgaatgctatgatgaggacggcgcacacaggggcaggcagataatt
ctgctgccgaccggagcagggaaatcactctgctttcagctcccggccctggtactggat
aaaccgaccctggttatttatccccttcttgcccttatgggagatcagcttcggcggatg
gaggaaaacgggatacggcctgttttattccgcggaaaccagaacacagaagaacgggaa
aatcagtaccggaggctggacggacgcgacggacagccgccggccaatctgattatcgcg
aatccggaaattctgtccgttgagaaaatcctgaaaaaaattgccgaaaggggcgtcggt
catattgcggtagatgaagcccactgcgtttccgaatggggagactctttccggccggca
tatctggacctgaaaaaaatcattgaaaaactgaacccgcccgctgttaccgcctttacg
gcgacggcctcccctcccgtactggaacgtattgcggagatactttttgacggaagagcc
catattgtacgcggtgattcagaccgccctaacatacaatattccgttatccactgcttt
aataaaccggcggcccttatcagggcggtcgccggaaatcagagacctcttgttgtattc
tgttccacacggggacagacagaacggacggcccttcttctccgggaaaccctgaatgat
actgatatccgtttttatcatgccggactcgaaaaagaagaaaagcaaaaaatagaatca
tggtttcacggacacgagcggggaattctatgcacaacctgcgcctggggaatgggcgtt
gacaaaaaaatgtccgcacggttattcacagggatatatctcccacaccggaagcctata
ttcaggaagcaggccggggcggacgcgacggaaaccgggcaaaagccattctgctctgga
gtaaaaaagaccggaggagaatcgaagccctgcctgaaagagagaaactgcgggcaatgc
cttttgtgcgctatgccgaatcaggcctgtgcagaagggaaatactgcttgacgcaatga
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