Brevibacillus parabrevis: PSE45_01360
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Entry
PSE45_01360 CDS
T08846
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bpab
Brevibacillus parabrevis
Pathway
bpab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSE45_01360 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpab03021
]
PSE45_01360 (rpoC)
03400 DNA repair and recombination proteins [BR:
bpab03400
]
PSE45_01360 (rpoC)
Enzymes [BR:
bpab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSE45_01360 (rpoC)
Transcription machinery [BR:
bpab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSE45_01360 (rpoC)
DNA repair and recombination proteins [BR:
bpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSE45_01360 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WDV95662
LinkDB
All DBs
Position
234787..238413
Genome browser
AA seq
1208 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDPGDTPLDKKQLLSEKEYRNYREKYGHSFQAMMGAEAIKRLLA
EIDLDKDVETLKEDLKTAQGQRRNRAIKRLEVLEAFRNSGNHPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERVQPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGSYYLTLEREGDKGEGTIYRDPHDAIAAYQQGFISLHTRIVLP
ARRLNKTSFTERQQNALIVTTVGKVIFNEIFPPDLPFINVPTKSNLQNMVPDEYFIFDKG
TNVTEFVRNLPDPGAVKKGFLGTIISECFRRFGTMKTSMILDRIKELGFTYSTKAGITIA
VADIAVPGKKKDILDEADQKVATVMTQFRRGLITEDERYDRVISIWSKAKDEVTEVLMKS
MDKFNAIFMMANSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREKDCGTDKGIRVTAIKDGREEIEKL
SDRLVGRTCFETLRHPETKEVIIGRNEEISEEVAEYIEKVGITSVYIRNVLACRTSHGVC
KLCYGRNLATGAEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQAVISEIDGEVVDIREGKDRREIEVRGEAENKVYAAPYGSRIKVSVGVKLSA
GDELTEGSVDPKEMLKVRGMRGVSNYILQEVQKVYRMQGVEINDKHVEVMIRQMLRKLRV
IDSGDTDLLPGSYVEVPEFEQANAKVLIEGKNPAVGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMSRYRNVKVASQVDYEAELEALKA
EQEAVSVE
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
gtgatagacgtgaacaacttcgaatatatgaagatcggcttggcttcccccgataagatc
cgttcgtggtctttcggggaagtgaaaaagccagagacgatcaactaccgcacactgaaa
ccggaaaaagacggcttgttctgcgaacgcatctttggaccgaccaaagactgggagtgc
cattgcggtaagtacaagcgtgtacgttataaaggtgtagtgtgcgaccgttgcggcgtg
gaagtgacccgcgccaaagtacggcgtgagcgcatggggcatattgaactggctgcccca
gtttctcacatctggtatttcaaagggattccaagccgcatgggcttggtgctcgacatg
tccccgcgttccctggaagaagttatctacttcgcttcttatgtagtaactgatccaggt
gatacaccactcgataaaaagcagctgctctcggaaaaagagtaccgcaactatcgtgag
aagtacggccactctttccaagcgatgatgggagctgaggcgatcaaacgcctgctcgcg
gaaatcgatctggacaaagatgtggaaacgttgaaagaagacctgaaaacagcacaaggc
caacgtcgcaaccgtgcgatcaaacgtttggaagtgctggaggcattccgcaactccgga
aaccacccggattggatggttctggacgtactgccggtaatcccgccagagcttcgccca
atggttcaactcgatggtggacgttttgccacttccgacttgaatgacctgtaccgtcgc
gtaatcaaccggaataaccgtctgaagcgcctgcttgaactgggtgctcctgacattatc
gtacaaaacgaaaaacggatgctgcaggaagcagtagacgcacttatcgacaacggtcgt
cgcggccgtccggtaactggaccaggtaaccgtccgctgaaatctctcagccacatgctg
aaaggtaaacaaggacgtttccgccaaaatttgctcggtaagcgcgttgactactccggt
cgttccgttatcgttgtaggacctaatctgaagatgtaccagtgcggtttgccaaaagaa
atggcattggaactcttcaaaccgttcgtgatgaaagagctcgtttccaaaggactcgct
cataacatcaagagcgccaagcgcaaggtagagcgcgttcagcctgaagtatgggacgtt
ctcgaagacgtgattcgcgagcatccggtgcttctgaaccgtgcccccaccttgcaccgt
ctgggtatccaggctttcgaaccagtattggttgaaggccgtgcgatccgtttgcacccg
ctcgtttgtacagcgtacaacgccgacttcgacggtgaccaaatggcggttcacgttccg
ttgtccgcagaggcgcaggcagaagcccgtatcctcatgctggcagcgcaaaacatcttg
aacccgaaagacggtaaaccagtagtaacgccatcccaggacatggtgcttggttcttac
tatctgacactggaacgtgaaggcgacaaaggcgagggtacgatctatcgcgatcctcat
gatgcgatcgctgcttaccagcaaggcttcatcagcttgcatacgcgcatcgttttgcca
gcgagacgcctgaacaaaaccagctttactgaacgccaacagaacgcgctcatcgtaacg
acagtagggaaagtgatcttcaacgagatcttccctccagatttgccgttcatcaacgtt
ccgaccaaatcgaacctgcaaaacatggttcctgacgaatactttatttttgacaaaggt
accaacgtaaccgagtttgtgcgcaacctgccagatccgggtgcagtgaaaaaaggcttc
ctgggaacgatcatttccgagtgcttccgtcgcttcggcacgatgaaaacttccatgatt
ctcgacagaatcaaagagcttggcttcacgtactccactaaagcgggtatcacaatcgcg
gtagcggacattgccgtacctggcaagaagaaagacattctcgatgaagcggatcaaaag
gttgcaactgtcatgacgcagttccgccgtggtctgattactgaggatgagcgttatgac
cgcgttatctccatctggtccaaagccaaggatgaggtaaccgaggtactcatgaagtcc
atggataagttcaatgcgatcttcatgatggcgaactccggtgcccgcggtaacgtatcc
cagatcactcagctcgctggtatgcgcggtctgatggcgaacccatccggtcgaatcatc
gagttgccgatcaaatccaacttccgtgaaggtctgactgtattggagtactttatctcc
acgcacggtgcgcggaaaggtctcgccgatacggcgctgcgtactgcggactcgggttac
ttgacccgtcgtctcgtagacgttgcccaagacgtgatcgtccgcgaaaaagattgcggt
acagataaaggtattcgtgttacagcgatcaaggatggccgtgaagaaatcgagaagctg
tctgaccgtctggttggacgtacatgcttcgagactctccgccacccggaaacaaaagaa
gtcatcatcggccgcaacgaggaaatttccgaagaggttgccgagtatatcgaaaaagtg
ggcatcacaagtgtctacatccgtaacgtacttgcttgccgcaccagccatggtgtctgc
aaactttgctacggacgcaacctggcaacaggagccgaagtggaagttggggaagcggtt
ggtattattgccgctcagtccattggtgagccgggtacccagctgaccatgcgtaccttc
cataccggtggggttgcgggagacgatattacccaaggtttgccgcgtattcaagagttg
ttcgaagcgcgcaatccgaaaggtcaagccgttatttctgaaatcgacggggaagttgtc
gacattcgtgaaggtaaagaccgtcgtgaaatcgaagttcgcggtgaagcggaaaacaaa
gtgtacgctgctccatacggctcgcgcatcaaagtatctgttggtgtcaagctgagcgct
ggtgacgagctcacggaaggttccgtcgacccgaaagaaatgctcaaagttcgcggcatg
cgcggcgtttccaactacattttgcaagaggtacaaaaagtttaccgcatgcagggtgta
gaaattaacgacaagcacgttgaggttatgatccgtcagatgctccgcaagctgcgcgtc
atcgacagcggagatacagacctcttgccaggctcctatgtggaagttcctgagtttgag
caggcgaacgcaaaagttctcatcgaaggcaaaaatccagcagtgggtcgtccggttctt
ttggggattacaaaagcatccctggaaaccgactccttcctgtcggcggcttccttccag
gagacaacgcgcgttctcacagacgcagcgatcaaaggaaaagtggatcgcctgctcggt
ctgaaagaaaacgtgattatcgggaaacttgttccggcaggtaccggtatgtctcgctat
cgcaatgtaaaagtagcaagtcaggttgattacgaagcagaactcgaagctctcaaagct
gagcaagaagcggtttctgtagagtaa
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integrated database retrieval system
