Brevibacillus parabrevis: PSE45_09900
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Entry
PSE45_09900 CDS
T08846
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpab
Brevibacillus parabrevis
Pathway
bpab03030
DNA replication
bpab03430
Mismatch repair
bpab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSE45_09900 (holA)
03430 Mismatch repair
PSE45_09900 (holA)
03440 Homologous recombination
PSE45_09900 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpab03032
]
PSE45_09900 (holA)
03400 DNA repair and recombination proteins [BR:
bpab03400
]
PSE45_09900 (holA)
Enzymes [BR:
bpab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSE45_09900 (holA)
DNA replication proteins [BR:
bpab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSE45_09900 (holA)
DNA repair and recombination proteins [BR:
bpab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSE45_09900 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_gamma3
AAA_35
Motif
Other DBs
NCBI-ProteinID:
WDV97248
LinkDB
All DBs
Position
2041800..2042840
Genome browser
AA seq
346 aa
AA seq
DB search
MPLLSAIREIRQKQFSPVYVLYGPEAFLAEEFLTLAKNQMIDPQFRDLNMSVYDCTETGL
TDILQDAETLPFLGEHRLVIARQAYFLTGSKPQTKVESDPDALLGYLQNPPPYTTLILHT
ESEKLDERKKLVKTLQQKAKVIPFPLLKDADLYGWVERQADKYQAKIGRQQAMKLVERVG
QELRLLDKEVEKLALYVGVGGSITDEIIEMLGARTLEQDVFGLIEQVASGKLDRALRMMY
DCMKTGEEPIKLIALLARQFRMLLHVKQLAPRGYSQQQMAGMIKMHPYAVKKAMEQARHF
SEDSLKKLLHILAEEDFRMKSGQVDKRLALELFVARAHAERQRTTG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgccactcctctcggcgattcgggaaatcaggcaaaagcaattttcgccggtctatgtg
ttgtatggcccggaggcatttctggccgaagaatttttgacactggcgaaaaatcagatg
attgatccgcagtttcgcgatctgaacatgagcgtatacgattgcacggagacggggctg
acagacattttgcaagacgcggagacgttgccgtttttgggcgagcatcggctggttatc
gccagacaggcttattttttgacggggagcaagccgcagacgaaagtggaaagcgatccg
gatgccttgctgggttatctgcaaaatccgcctccgtatacgaccttgattttacatacg
gagtcagagaagctggacgaacggaaaaagctcgtcaaaacgctgcagcaaaaagcaaaa
gtcattccgtttccgttgctgaaagatgctgacttgtacggttgggtggaacggcaagcg
gataagtaccaggcaaaaatcggacgtcagcaggcgatgaagctggtggaacgcgtaggg
caagaattgcggcttctggacaaggaagtggagaagctggccttgtatgtaggagtcggg
ggaagcattacggatgagataatcgaaatgcttggcgcacggacgctggagcaggatgtg
ttcgggctgattgagcaagtagcgtcaggcaagctggacagggcattgcgcatgatgtac
gactgcatgaagacaggcgaggagccgatcaagctgattgccttgctggccagacagttc
cgcatgcttttgcatgtcaagcagttggcaccgcgcggttactcgcaacagcaaatggcc
gggatgatcaagatgcatccgtacgcggtgaaaaaagcgatggagcaggcgcggcatttt
tccgaggactcgttgaaaaagttgctgcacattttggcggaagaagattttcgcatgaag
tccggacaagtggacaagcggcttgccttggagctgtttgttgcgcgggcgcatgcagag
cggcagcggacgaccgggtag
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