Brevibacillus parabrevis: PSE45_16165
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Entry
PSE45_16165 CDS
T08846
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bpab
Brevibacillus parabrevis
Pathway
bpab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSE45_16165 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpab03019
]
PSE45_16165 (pnp)
03016 Transfer RNA biogenesis [BR:
bpab03016
]
PSE45_16165 (pnp)
Enzymes [BR:
bpab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PSE45_16165 (pnp)
Messenger RNA biogenesis [BR:
bpab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSE45_16165 (pnp)
Transfer RNA biogenesis [BR:
bpab03016
]
Prokaryotic type
tRNA degradation factors
PSE45_16165 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
ATP-grasp
SPATA25
Motif
Other DBs
NCBI-ProteinID:
WDV93196
LinkDB
All DBs
Position
complement(3544767..3546911)
Genome browser
AA seq
714 aa
AA seq
DB search
MEQQYRTYDFELAGRKLTLEFGKMAKQAHGSVLVRYGDTAILSAVTVSKEPKALDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFAEGFRNDVQIVNTVLSV
DQDCSPEIAAMIGTSAALCVSEIPFEGPIAGVIVGRIDGEFIINPTVEQAEKSDIHLVVA
GTHKAINMVEAAANQVPESVMLEAIMTGHEVIKKLVEFQNQIVAEIGKEKMEVILHEVDP
EIDQAVRAFAEARLKEAVRIEEKQARYDAIDAIKDETKEHFAAKDPENYPEQEKMIGEVL
GNIVKDEVRRLITEEKVRPDGRALGEIRPLSSETSILSRTHGSAMFTRGQTQALSVCTLG
ALGDVQILDGLGLEESKRFMHHYNFPPYSVGEARPLRPPGRREIGHGALGERAIEPIIPS
EHEFPYTIRLVSEVIESNGSTSQASICASVLALMDAGVPIKAPVAGIAMGLIMSKDEQSF
SILTDIQGMEDHLGDMDFKVAGTEAGVTAIQMDIKISGINREILEQALEQAREGRLHILK
HMMSTISKPREELSPYAPKILTMSINPEKIRDVIGPQGRVINKIIEETGVKIDIEQDGRV
FIASINHEANLRAKQIIEDLVREVAVGQIYLGTVKRVEKYGAFIELFAGKEGLCHISQLA
EERVAKTEDVVAVGDKVQVKVTEIDDQGRINLSRKAVLKEQAAAQAENAPTQAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaataccgtacatacgattttgaactggcaggccgcaagctgaccctggaa
tttggcaaaatggccaaacaggctcacggatcggttctggttcggtacggcgatacggca
atcctgtctgcagttacagtctcgaaagagccaaaagctcttgattttttcccgttgact
gttaactatgaggaacgtctctatgcagtcggaaaaattcccggcggctttattaaaaga
gaaggtcgtccaagcgaaaaagcgattttggcaagccgcttgattgaccgcccaattcgt
ccccttttcgcagaaggattccgtaacgacgtacaaattgtcaatactgttctgtcggtt
gatcaggactgctcaccggaaatcgccgctatgatcggtacgtctgccgctctttgcgtt
tccgaaattccgtttgaaggtccgattgccggtgtcatcgttgggcgcattgacggcgag
ttcatcatcaacccgactgtggagcaggcagaaaaaagcgatattcacctcgtagtcgca
ggtacacacaaagcgatcaacatggtcgaggctgccgcaaatcaagtgccggagtctgtc
atgctcgaagcaatcatgacaggtcacgaggttatcaagaagctggttgagttccaaaac
cagatcgtggcagaaatcggcaaagaaaaaatggaagtcatcctgcatgaagtcgatccg
gaaatcgatcaggctgtgcgcgcatttgcagaagcacgtctgaaagaagcggttcggatt
gaagaaaagcaggctcgttacgacgcgattgacgcgatcaaggacgagacgaaagagcat
ttcgctgccaaagatccggaaaactatccggagcaggaaaagatgattggcgaagtgttg
ggcaacatcgtcaaagacgaagttcgccgcctcattaccgaagaaaaagttcgtccggat
ggacgggctcttggcgaaattcgcccgctttccagcgagacaagcatcttgtcccgtacg
cacggttccgcgatgttcacccgtggtcaaacacaagctttgagcgtgtgcacgcttggg
gcgctgggtgatgtgcaaatcctggacggactcggtctggaagagtcgaagcgattcatg
caccattacaacttcccgccatacagcgtaggtgaagctcgtccactgcgtcctccaggc
cgtcgtgaaatcgggcacggggcgttgggtgagcgcgcgattgagccgatcattccatct
gaacacgagttcccgtacacgatccgactggtttccgaagtcatcgagtccaacggttcg
acgtcgcaagcttccatttgcgcgagcgtattggctctgatggatgcaggggtgccgatc
aaagcgcctgtagcaggtatcgcaatgggcttgatcatgagcaaggacgaacagtctttc
tcgatcttgacagacatccaaggcatggaagaccacttgggcgatatggacttcaaagtg
gctggcaccgaagcgggtgtaaccgcgatccagatggatatcaaaatttccgggatcaac
cgcgaaatcttggagcaagctttggagcaagcgcgtgaaggtcgtttgcacatcctgaag
cacatgatgagcaccatttccaaaccgcgtgaagagctgtctccttatgcgcctaagata
ttgaccatgtcgatcaatccggagaaaatccgcgatgtcatcggcccacaaggtcgcgtc
atcaacaagattatcgaagaaaccggcgtaaaaatcgacatcgagcaagatggacgagtt
ttcatcgcttcgatcaatcacgaagcgaatctgcgtgcgaaacaaatcatcgaggacctg
gttcgcgaggttgctgtcggccagatttatctgggaaccgtcaagcgcgtagagaagtac
ggagcgttcatcgaactgtttgcaggcaaagaaggcttgtgccatatctcccaattggca
gaagaacgcgtagccaagacggaagacgtagttgctgttggcgacaaggtgcaagtgaag
gtgacagagattgacgatcaaggtcgcatcaatctgtcccgcaaagctgtactcaaagag
caagctgcggctcaggccgaaaatgctccgacccaagcagaataa
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