Brevibacillus parabrevis: PSE45_16180
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Entry
PSE45_16180 CDS
T08846
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpab
Brevibacillus parabrevis
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpab03016
]
PSE45_16180 (truB)
Enzymes [BR:
bpab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSE45_16180 (truB)
Transfer RNA biogenesis [BR:
bpab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSE45_16180 (truB)
Prokaryotic type
PSE45_16180 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WDV93198
LinkDB
All DBs
Position
complement(3548522..3549448)
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AA seq
308 aa
AA seq
DB search
MSSNHGVLVIDKPAGMTSHDCVARIRRLYGTKKVGHTGTLDPDVTGVLPICVGNATRLVE
YLQELPKRYSVVMRLGSATTTEDASGELLEQAQVDAASITQERIESLFASFLGEIEQVPP
MFSAVKVNGKRLYDLAREGTVIERQARKVTLYELTLHEIKTDQDYVDISFSCTCSKGTYM
RTLCVDLGRSLGYPAHMKLLRRIKSGPFMEGEAIPLQELEERAANGEDLSRYLVSIPQAI
SFLPSYQVKPERTRAVRNGLATALPGVTAEVGSLICLFAGEELLGIHRVCRGDKGLFAKA
EKVFPAEV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaaccatggcgtgctggtaatcgacaagccggcgggtatgacctcccacgac
tgcgtggcgcgtatccgtcggctgtatggtacaaaaaaagtcgggcatacgggaacactc
gatccggatgtgaccggagtgctcccgatatgtgtcgggaacgctacccggctggtggag
tatttgcaagaactgcccaagcgctattcggtggtcatgcgcctcggctccgcgactacg
acggaggacgcttccggagagctgctggaacaggcgcaagtagacgctgcgtccattacg
caggagcgcatcgaaagcttgtttgcctcctttttgggtgaaatcgaacaagtgccgccg
atgttttcagccgtcaaagtaaacggaaagcgtctttacgacttggcgcgagaaggcact
gtgattgagagacaggcgcgcaaagttacgctttacgagttgacgcttcacgagatcaag
acagaccaagactatgtcgacatctctttctcctgcacgtgctcgaaaggtacatacatg
cgcaccttatgtgttgacctcggacgctctctggggtatcctgcccatatgaagctgctt
cggcgaatcaagagcggtccgttcatggaaggggaggcgattcctcttcaggaactggag
gagcgggctgccaatggggaggatctctcccgttatcttgtctccatcccacaggcgatt
tcatttttgccgtcttatcaggtcaagccggagcgaacccgcgcggtacgcaacggactg
gcgactgcactgccgggtgtaacggccgaggttggcagcttgatctgcctgtttgcaggg
gaagagctgcttggcattcatcgcgtgtgccgtggggacaaaggtcttttcgccaaagca
gaaaaagtctttccagccgaggtgtaa
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