Brevibacillus parabrevis: PSE45_20405
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Entry
PSE45_20405 CDS
T08846
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bpab
Brevibacillus parabrevis
Pathway
bpab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSE45_20405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpab03019
]
PSE45_20405
03009 Ribosome biogenesis [BR:
bpab03009
]
PSE45_20405
Enzymes [BR:
bpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSE45_20405
Messenger RNA biogenesis [BR:
bpab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSE45_20405
Ribosome biogenesis [BR:
bpab03009
]
Prokaryotic type
rRNA helicases
PSE45_20405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WDV93985
LinkDB
All DBs
Position
complement(4382877..4384355)
Genome browser
AA seq
492 aa
AA seq
DB search
MAKSFASFGFRPELMQGIQDLYYKEPTPIQEEAIPLILEGKDVIGQAQTGTGKTAAFMLP
ILNRLEEGKRDIQALILTPTRELSIQIAKEVEKLGKHLDVNVLSLHGGADIDKQLSKLKA
TVHVVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTPSQRQVL
LFSATMPDLVKRLAHRFMKQPPHLKIEGKQKTVEKIEQFYYVVNQSDKTDALVDVVEQEQ
PFLTIVFANTQVRVQQLTARLQENGLSAQALYGDLSQSKREQLMRQFREMRFQYLVATDI
AARGLDVEGITHVINYDLPNDVDSYIHRVGRTGRAGQSGKAISLISPRQKNLMGRFAKAT
KASIEERILEPGRHLDAGRRERAQEREAHFIELRAQQAKEQQKEKDKEFAPVREALKKKA
KVKPGYKKKLARELGELQTQYEKNRKKAEAIAARKAGKSAKPADAKKAGKGGANHSAKGA
RPFRQDSGKSRG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgtttgcgtcttttggctttcgaccggagctgatgcaagggattcaagac
ctgtattataaagaaccgacgccgatccaggaggaagcgattccgctgattctggaaggg
aaagatgtgattggacaagcgcagaccggaaccggaaaaacagcagcgttcatgctgccg
atcctgaaccgtctggaggaaggaaagcgcgacattcaagcgctgattttgaccccgacg
cgcgagctgtccattcagattgccaaagaagtagagaagctgggcaagcacctcgatgtg
aatgtgctgtctttgcacggcggagcggatattgacaaacagctgagcaagctgaaagcg
acggtacatgtggtcgtcgggacgccaggccgcgtactcgatcacatgaagcgcggttcg
ctgcatttcggacggatttccacgcttgtcttggacgaagcggacaagatgatggagatg
ggctttttggaggatgtcgagcaagtgatcgtccacacgccatcgcagcgtcaagtgctg
ctcttctccgcaaccatgcccgatttggtcaagcggctcgctcatcgcttcatgaagcag
ccgccgcatcttaaaatcgagggcaagcaaaagaccgtagagaaaatcgagcaattttac
tacgtcgtcaaccaaagtgacaaaacagatgcgctcgtcgatgtcgtggagcaggaacag
ccgtttttgacgattgtgttcgcgaacacgcaagtccgcgtgcagcaactcacggctcgt
ttgcaggaaaacggactgtccgcgcaagcgctgtacggagatttgtcgcaaagcaagcgc
gagcagttgatgagacagttccgcgagatgcgcttccagtacctggttgccaccgatatc
gcggcgcgcgggctggacgtcgaaggcatcacgcatgtcatcaactacgatttgcccaac
gacgtcgacagctacattcaccgcgtaggccgtacaggacgtgcgggacagagcggaaaa
gcgatctcgctcatttccccgcgccaaaaaaacttgatgggccgctttgccaaagcgacg
aaggcgtcgattgaagagcgcattctggagccaggccgccatctggatgcaggccgtcgc
gagcgtgcgcaggagcgtgaggcccacttcatcgagctgcgcgcccaacaggcgaaagaa
cagcaaaaggaaaaagacaaagagttcgctccagtgcgtgaagctttgaagaaaaaagcg
aaagtaaagccaggctacaagaaaaagctggcgcgcgagctgggcgagcttcagacgcag
tatgagaaaaaccgcaaaaaggcagaagcgattgctgccagaaaagcagggaaatcggca
aagccggcagatgccaaaaaagcgggaaaaggcggagcaaaccactctgccaaaggggca
agaccgttccgtcaagattcgggcaagtccagagggtaa
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