Brevibacillus parabrevis: PSE45_25055
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Entry
PSE45_25055 CDS
T08846
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bpab
Brevibacillus parabrevis
Pathway
bpab02020
Two-component system
bpab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSE45_25055 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSE45_25055 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpab03021
]
PSE45_25055 (rpoN)
Transcription machinery [BR:
bpab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSE45_25055 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_3
HTH_24
Sigma70_r4_2
Sigma70_r4
MarR
Cob_adeno_trans
SF3b1
Motif
Other DBs
NCBI-ProteinID:
WDV94871
LinkDB
All DBs
Position
complement(5364240..5365613)
Genome browser
AA seq
457 aa
AA seq
DB search
MNMGLGLYQEQTLKLVMTPELRQAITILQYSAVDLISYLQDQANENPVFDLEVAGEVASA
KAEKPAPEIDWKEIVGNRATGEYSPAKNESTYNPLDYVQQGSENLYEHLERQLGYVKGFS
PLQRQIALFLIGNLDEKGYLEITLEEASRNLGVEMLEIEDVLSVLQHFDPVGVAARSLEE
CLLLQLEHLALDDEKIVMVVRNHLQDLADNRYQRIADKVGCTPQEVQTMADLVRTLNPRP
GAQFSQSETRYVIPDVTVEKVGSEYVVLVNDVAAPRLKINSFYEKMLSQQKSQEEAKQFI
HDKLNAAMWLAKSLEQRRLTLMRVTQAIVDMQRDFFDRGIHYLKPMTQKEIAERVSLHES
TISRATSNKYVQTPRGIFELKYFFTSALTTSSGSATSSESVKRRIKALIEQEDRKAPLSD
QKLGEMLLAEGIEISRRTVAKYREEMLIPSSAKRKRF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgggactggggttgtatcaagaacagacgctgaaattagtgatgacgccggaa
ttgcgtcaagccattaccatattgcaatactcagctgttgacctgatttcctatttgcag
gatcaggccaacgaaaatcctgtattcgacctggaagtagcgggagaagtggcctcggcg
aaagccgaaaagccggcgccagagattgactggaaggaaatcgttggcaaccgcgcgacg
ggtgagtactctccggcaaaaaatgaaagcacttacaacccgttggattatgttcagcaa
ggcagtgaaaacttgtatgagcatctggagcggcagcttggctacgtgaagggcttctcc
cctttgcaaaggcaaatcgcactgtttttgatcggaaacctggacgaaaaaggttacctg
gaaataacgctggaggaagcgagccgcaatctcggagtagagatgctggagattgaggat
gtactgtcggtcttgcagcactttgacccggtaggagtagcggcgcgcagtctggaggaa
tgtttgctgttgcagttggagcacctggcgctcgatgacgagaagatcgtcatggtcgtc
cgcaaccacctgcaagacctcgcagacaaccgttaccagcgcattgccgacaaagtgggt
tgcacgccgcaggaagtgcagacgatggcggatctcgttcggacgctgaatcccagaccg
ggtgctcagttctctcaatccgagacaagatacgtcatcccggacgtgaccgtggaaaaa
gtcggcagcgagtacgtggtgctagtcaacgatgtggcggctccgcgcttgaaaatcaac
agcttttatgaaaaaatgctcagtcagcaaaaaagtcaggaagaagcgaagcagtttatc
cacgacaagctcaacgccgccatgtggctggcgaagagcctggaacagcgccggctgact
ctcatgcgcgtaacgcaggcgatcgtggacatgcaacgcgacttttttgaccggggcatc
cattatttgaagccgatgacgcaaaaggaaattgccgagcgcgtcagcttgcatgaatcg
acgatcagccgggcaaccagcaacaaatacgtgcaaacgccgcggggaattttcgagctg
aaatactttttcacttcggcactcaccacttccagcgggtctgcaacgtcctccgagagc
gtaaaacgcaggatcaaggcgctgattgagcaggaggatcgcaaggcgccactctccgac
cagaagctgggggaaatgctgcttgcagaaggaatcgagatttctcgccgcacggtcgcc
aagtatcgggaggaaatgctgattccatcctcggccaaacgaaagaggttttaa
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integrated database retrieval system
