Bacillus pacificus: LMD38_00065
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Entry
LMD38_00065 CDS
T07947
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20391
HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
Organism
bpac
Bacillus pacificus
Pathway
bpac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMD38_00065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpac03000
]
LMD38_00065
Transcription factors [BR:
bpac03000
]
Prokaryotic type
Helix-turn-helix
Other families
LMD38_00065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNPP_C
HTH_3
TPR_12
HTH_31
HTH_19
TPR_2
VtrA_C
TPR_Slam
TPR_1
TPR_YpiA
TPR_7
MIT_ATG38
Motif
Other DBs
NCBI-ProteinID:
UEP94841
LinkDB
All DBs
Position
19800..20657
Genome browser
AA seq
285 aa
AA seq
DB search
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPI
IHFYEVLIYSDMERNKQLKDRIIMLCKEKKYKEIYNKVWNELKKEEYHPELQQFLQWQYH
VAAYILKKIDYEYCISELKKLLNQQLAGIDVYQNLYIENAIANIYAENGHFKKSIELYEN
ILKQLEVLHDNKEFDVKVRHNHAKALYLDNQYEEALCHANKAIELSCQINSMTLIGQLYY
RKVECLEKLECDRAEIEDACEKAYFFFDILGNHTLKELIIKRMKK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcagaaaaattaggaagtgaaattaagaaaattagggtgatgcggggattaaca
caaaaacagttatccgagaatatatgtcaccaatcggaagtgagccgaattgaatcgggc
gcggtatacccaagtatggatatattgcaaggtattgcagcaaagttacaagttcccatt
atccatttttatgaggtacttatttattctgacatggaaaggaataagcagttaaaagac
cgaattattatgctctgtaaggaaaagaaatataaagaaatttataataaagtatggaat
gagttgaaaaaggaagaatatcatcctgagcttcagcagtttcttcaatggcaatatcat
gtagctgcttacatattgaaaaaaattgattacgaatattgtatttcagaattaaagaaa
ttgctcaatcaacaattggcagggatagacgtatatcagaacctttatattgaaaacgca
attgcaaacatttacgctgaaaatggccattttaagaagagtattgagttatatgaaaat
atattaaaacaattagaagtattacatgataataaagagtttgatgtaaaggtgagacat
aatcatgcaaaagcattatacttggacaatcaatacgaagaagcactttgtcatgcaaat
aaagccattgaattatcgtgtcaaattaatagtatgacattgattggacagttatactat
cgaaaagttgaatgcctagaaaagctagagtgtgatagagcagaaattgaagatgcttgc
gaaaaagcttacttctttttcgatatattaggaaaccatacattaaaagaattaattata
aaaagaatgaagaaataa
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