Bacillus pacificus: LMD38_00250
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Entry
LMD38_00250 CDS
T07947
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpac
Bacillus pacificus
Pathway
bpac00260
Glycine, serine and threonine metabolism
bpac00460
Cyanoamino acid metabolism
bpac00630
Glyoxylate and dicarboxylate metabolism
bpac00670
One carbon pool by folate
bpac00680
Methane metabolism
bpac01100
Metabolic pathways
bpac01110
Biosynthesis of secondary metabolites
bpac01120
Microbial metabolism in diverse environments
bpac01200
Carbon metabolism
bpac01230
Biosynthesis of amino acids
bpac01240
Biosynthesis of cofactors
bpac04981
Folate transport and metabolism
Module
bpac_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMD38_00250 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LMD38_00250 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LMD38_00250 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LMD38_00250 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LMD38_00250 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LMD38_00250 (glyA)
Enzymes [BR:
bpac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LMD38_00250 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UEP94875
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All DBs
Position
56161..57402
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AA seq
413 aa
AA seq
DB search
MDHLKRQDEKVFAAIEAELGRQRSKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRY
YGGCEHVDVVEDIARDRVKEIFGAEHVNVQPHSGAQANMAVYFTILEQGDTVLGMNLSHG
GHLTHGSPVNFSGVQYNFVEYGVDAESHRINYDDVLAKAKEHKPKLIVAGASAYPRVIDF
KRFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPHAHFVTTTTHKTLRGPRGGMILCEE
QFAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFKTYAQNIINNANRLAEGLQKEG
LTLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVRIGT
AAVTSRGFGLEEMDEIASLIAYTLKNHDNEAALEEARKRVEALTSKFPMYPNL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtggatcatttaaaacgtcaagatgaaaaggtatttgctgcaattgaggcagaactaggg
agacagcgttcgaagattgagttaattgcttcggaaaacttcgtaagtgaagcagtaatg
gaggcgcaaggttctgttttaacgaataagtatgctgaaggatatcctgggaaacgttac
tatggtggttgtgaacatgtagacgtagtagaagatatcgcacgtgatcgcgtaaaagaa
attttcggcgcagagcacgtaaatgttcaaccgcattctggtgcacaagcgaacatggca
gtatacttcacgattttagagcaaggcgatacagtacttggtatgaatttatctcatggt
ggtcacttaacacacggaagccctgttaacttcagtggagtacaatataatttcgtagaa
tatggcgtggatgctgaatctcaccgtattaattacgatgatgtattagcaaaagcgaaa
gaacataaaccaaaattaatcgttgcaggtgcaagtgcataccctcgtgttatcgatttc
aaacgattccgtgagattgcagatgaagtgggcgcatacttaatggttgatatggcacat
atcgctggtttagtagcggctggtttacatccaaatccagtgccacatgcacatttcgtt
acaacaacaacacataaaacattacgtggtccacgtggtggtatgattttatgtgaagag
caatttgcaaaacaaattgataaatcaatcttccctggtattcaaggtggtccacttatg
cacgtaatcgctgcaaaagctgttgcgtttggtgaggcacttcaagatgattttaaaaca
tatgcacaaaatatcattaacaatgcgaaccgcttagctgaaggtcttcaaaaagaagga
cttacacttgtttctggtggaacagacaatcacttaatcctaattgatgttcgtaaccta
gaaatcacaggtaaagtagcagagcacgtattagacgaagttggtattacagtgaacaaa
aatacaattccatttgaaacagcaagcccatttgtaacaagtggtgtacgtatcggtaca
gcagctgtaacatctcgtggtttcggtttagaagaaatggatgaaattgcgtcacttatt
gcttacacattaaaaaatcatgacaatgaagctgcattagaagaagcacgtaagcgtgta
gaagcgttaacgagcaaattcccaatgtatccaaatctataa
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