Bacillus pacificus: LMD38_01290
Help
Entry
LMD38_01290 CDS
T07947
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bpac
Bacillus pacificus
Pathway
bpac02020
Two-component system
bpac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMD38_01290
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LMD38_01290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpac03021
]
LMD38_01290
Transcription machinery [BR:
bpac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMD38_01290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_32
Motif
Other DBs
NCBI-ProteinID:
UEP95067
LinkDB
All DBs
Position
276302..277609
Genome browser
AA seq
435 aa
AA seq
DB search
MKASLLQEQSLRLAMTQELRQAITMLQYNVQELSEFLYEQSLENPLIELGGFEREKKKSS
NNSKSTSKQVENQMEIYSVDSTTIQQHLLNQIQYYKIEEEERKVASFIIMNMDGNGYLQE
TNEELANLLSAPLHVVDRSVELVQSLEPAGVGARNIQECLTLQLKRLQRRDGLAEEVVED
HFAYFVKKDWRKLVQVLKCSNEELQSAVNCITSLQPKPGLAFSSDKPLYIVPDMAVKKDG
DRLVLQMNERNMPRIEIHSEYSALLNNSESEVASYVSEKYQHVQWIMRSLKQRKQTLLQV
MTIIMEKQRDFFWKGPEYLKPLALKEVAEELSVHESTISRATRNKYVQTPHGLFEMKSFF
SNAVSTTEDEAVSTKRVKQFIQTLVEAENKKKPLSDQKISKLLEEEHEIVISRRTVAKYR
EQMHIPASSLRKTIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggcaagtcttttacaagaacaaagcttacgtttggcaatgacacaagagttaagg
caagcgattacaatgctccagtataatgtacaagaattatcggagtttttgtatgagcaa
tcgttagagaatccccttattgagttaggtggttttgagagggagaagaaaaagagctct
aacaacagtaaaagtaccagcaaacaagtcgagaatcagatggaaatctacagtgtggat
tctacaacgattcagcaacatttattaaatcaaatacagtattataaaatagaggaagaa
gagcgaaaagtagcttctttcattattatgaacatggatggaaatgggtatttacaagaa
acgaacgaggagttagcaaatctcctttccgcaccgctacatgtagttgaccgctctgta
gagcttgtccaatcacttgagccagcaggggtaggggcgcgtaatattcaggaatgtcta
actttacaattgaagcgcttacaaagacgggatggattagcagaagaggttgtagaagac
catttcgcttatttcgtgaagaaagattggcgaaagctcgttcaagtgttgaagtgtagt
aatgaggaattacagagtgctgtaaattgtataacgtcattacaaccaaaaccaggtctt
gcgttttcttctgataaaccactttatattgtgcctgatatggcggtgaaaaaagatggt
gatcgtctcgttttacaaatgaatgagagaaatatgccgagaattgaaattcattctgaa
tatagtgcgcttcttaataatagtgaaagtgaagtagcatcttacgtttcagaaaagtat
cagcatgtacagtggattatgcgtagtttgaaacagagaaaacaaacgcttttgcaagtg
atgaccattattatggaaaaacaacgtgatttcttctggaaaggtccggagtatttaaag
ccacttgctttaaaagaagtagcagaagagttaagcgtccatgaatcgacaattagtcgg
gcaacgcgaaataaatatgtgcaaacaccacacggtttatttgagatgaaatcgttcttt
agtaatgccgtttcgactactgaagatgaagcggtttctacaaagcgtgtaaaacaattt
attcaaacgcttgttgaggcggagaataagaaaaagccactttcagaccaaaagatttca
aaattgttagaagaagagcatgaaatcgttatttctcgaagaacagtggcgaagtatagg
gaacaaatgcacatcccagcgtcgtcattacgaaaaacgatcggatag
DBGET
integrated database retrieval system
