Bacillus pacificus: LMD38_03395
Help
Entry
LMD38_03395 CDS
T07947
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpac03016
]
LMD38_03395 (thpR)
Enzymes [BR:
bpac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LMD38_03395 (thpR)
Transfer RNA biogenesis [BR:
bpac03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LMD38_03395 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UEP95436
LinkDB
All DBs
Position
650863..651408
Genome browser
AA seq
181 aa
AA seq
DB search
MELHYFVAITLPNHIKEVLSNYKEEMQEELPFRSWVHKEDYHITLSFLGSATEEQLEGIK
NGLQALIEMKELLFTLQGFSTFGMEDRPRIFWAKVSENQDLFQLQKQVHVMCEENGFSLE
TRPYHPHITVARKWVGEEKFDLEHIKEVPEISFQADTITLYESHVKETPKYKAIAEIKLQ
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcattattttgtcgcaattacgttaccaaatcatataaaagaagtgctgtct
aactataaagaggaaatgcaagaggaattaccatttcgttcatgggtacataaagaagac
tatcatattaccctttcgtttttaggtagtgcgacagaggaacaattagaaggaataaag
aatggattacaagcacttatagaaatgaaagaactattgttcacattacaaggattttca
acgtttggtatggaagacaggccgcgtattttttgggcaaaggtaagcgaaaatcaagat
ttgtttcaattgcaaaagcaagtacacgttatgtgtgaagagaatggattttctttagaa
acgcgcccgtatcatccgcatattactgttgcccgtaaatgggtaggagaagaaaagttt
gatttagaacatataaaggaagtgcctgaaatatcatttcaagcggatacgattacttta
tacgaatctcatgtaaaggagacaccgaaatataaagcaattgctgaaataaaattacaa
aaatag
DBGET
integrated database retrieval system
