Bacillus pacificus: LMD38_05500
Help
Entry
LMD38_05500 CDS
T07947
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bpac
Bacillus pacificus
Pathway
bpac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMD38_05500 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_05500 (recO)
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMD38_05500 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMD38_05500 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
UEP95833
LinkDB
All DBs
Position
1056415..1057161
Genome browser
AA seq
248 aa
AA seq
DB search
MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI
QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH
YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQD
QYHIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCGIYLKSRRFL
EQLDKFQI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaaagttgagggcatcgttatccgtacgacagattacggagaaacgaacaag
attgttacaatattctcaagagaattgggtaaggtaagtgcaatggcaagaggagcgaaa
aaaccgaaaagccggttagcatctgtttcgcaacttatgacacatggtcattttcttatt
caaatgggatctggacttggaactttgcaacaaggcgagattatttcaactatgaaagaa
attcgcgaggatatatttttaactgcttatgcatcatttattgttgagttaactgataaa
gcaacagaagataaaaaacataatccatatttatttgaaatgttatatcaaacgttgcat
tatatgtgtgagggtgttgatccagaagtattatcattaatttatcaaacgaaaatgctt
ccggtattagggatgcgcccgtactttgatacatgtgcgatttgtcatcaagaaacagat
tttgtcgccttctctgttagggagggcggttttctgtgctcacgtcatgctgagcaagat
cagtatcatataccagtgggggaagccgttcataaattattgcgtcttttctaccacttc
gatttacatagacttggcaatgtatcagtgaaggatagtacaaaaaaacaaatgcgttta
gtattgaatacatattatgatgaatattgcgggatttatttgaaatcaagacgtttctta
gaacaacttgataagtttcaaatataa
DBGET
integrated database retrieval system
