Bacillus pacificus: LMD38_06375
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Entry
LMD38_06375 CDS
T07947
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpac03016
]
LMD38_06375 (rnz)
Enzymes [BR:
bpac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LMD38_06375 (rnz)
Transfer RNA biogenesis [BR:
bpac03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LMD38_06375 (rnz)
Prokaryotic type
LMD38_06375 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UEP95990
LinkDB
All DBs
Position
1206760..1207683
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AA seq
307 aa
AA seq
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MEFVFLGTGAGVPSKGRNVSAIALQLLEERGQTWLFDCGEATQHQILHTSVRPRRIEKIF
ITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEVALSVSTTHVKYPLEIVEI
TEEGTVFEDNEFHVETKRLSHGIECFGYRIIEKDIQGALLVDKLLEMGVKPGPLFKRLKD
GEVVELENGTILNGQDFIGPPQKGRIITILGDTRFCEASRELAQDADVLVHEATFAAEDE
QQAYDYFHSTSKQAASIALQANAKRLILTHISSRYQGDTYKELLKEARELFSNTEIATDL
KSFPVER
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtggaatttgtatttttaggaactggtgcaggtgttccttcgaaaggaaggaacgtttca
gcaattgctttgcaattgttagaagaacgaggacaaacttggttatttgattgtggcgag
gcgacgcaacatcaaatattacatacatcagtacgtccacgccgcattgaaaaaatattt
attacgcatttacatggtgatcatatttttggattgcctggtttattaggaagccgttcg
tttcaaggagggactacacctttaacagtgtatggaccaaaaggaattaaacaatttatt
gaagtagcattatcagtaagtacgacacatgtaaaatacccacttgaaattgttgagata
acagaagaaggtaccgtgtttgaagataatgaatttcatgtggaaacgaaaagattgtca
cacggtattgaatgttttgggtatcgtattatagagaaagatatacaaggcgccctttta
gtcgataaattgctggagatgggtgtgaaaccaggtccactctttaagcgtttaaaagat
ggagaagtggttgaattggaaaatggtacgatactaaacggacaagattttatcggccca
cctcaaaaaggaagaattattaccattttaggtgatacaagattttgtgaagcgagtaga
gagctggcacaagacgctgacgtactagttcatgaagcaacttttgcggcagaagatgaa
caacaagcgtatgattattttcattccacatctaagcaagctgcgagtattgcacttcag
gcaaatgcaaaacgattaatattgactcatattagttctcgttatcaaggggatacatat
aaggaattattgaaagaggcaagagagctattttctaatacagaaatagctacggattta
aaatcatttccagtagaaagataa
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