Bacillus pacificus: LMD38_07885
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Entry
LMD38_07885 CDS
T07947
Symbol
rncS
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpac03019
]
LMD38_07885 (rncS)
03009 Ribosome biogenesis [BR:
bpac03009
]
LMD38_07885 (rncS)
03036 Chromosome and associated proteins [BR:
bpac03036
]
LMD38_07885 (rncS)
Enzymes [BR:
bpac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LMD38_07885 (rncS)
Messenger RNA biogenesis [BR:
bpac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMD38_07885 (rncS)
Ribosome biogenesis [BR:
bpac03009
]
Eukaryotic type
90S particles
RNase
LMD38_07885 (rncS)
Prokaryotic type
rRNA processing factors
LMD38_07885 (rncS)
Chromosome and associated proteins [BR:
bpac03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LMD38_07885 (rncS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
NTP_transf_4
Phage_P2_GpU
Staufen_C
Dicer_dimer
Motif
Other DBs
NCBI-ProteinID:
UEP96272
LinkDB
All DBs
Position
1488936..1489673
Genome browser
AA seq
245 aa
AA seq
DB search
MPYRKYREKKYETKYREAFKVFQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERL
EFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGE
EMTGGRERPALLADVFEAFIGALYLDQGLETVWGFLKEIVYPKINEGAFSHVMDYKSQLQ
ELIQRDGSGNIEYQILQEKGPAHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKK
LKEQL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccgtaccgtaaatatagagaaaaaaaatacgaaacaaaatatcgtgaagcgtttaaa
gtatttcaagaaaaaataggtattacgtttacagatgaaaaattattgattcaagcattt
acgcattcatcgtatgtgaatgagcatcgaaaaaaaccgcatgaagataatgagcgtctc
gaattccttggagatgcagtattggaacttactgtatcgcagtatctgtttcaaaaatat
ccgacaatgagcgaaggagagttaacaaaactacgtgcagctattgtatgtgaaccatct
cttgttcgttttgcaaacgagttgtcatttggtagcctagttttattaggaaaaggtgag
gaaatgacaggcggacgtgaacgaccagctttattagcggatgtctttgaagcgtttatt
ggtgccctttatcttgatcaagggctagaaacagtatggggcttcttaaaagaaattgta
taccctaaaattaatgaaggtgctttttctcatgtgatggattataagagtcaattacaa
gagttgattcagcgtgatggtagtggcaatattgagtatcaaattttgcaagaaaaagga
ccggctcacaatcgagaatttgtgtcacgtgttacgttaaataacgtggccttaggtctt
ggtagtggcaagtcgaaaaaagaagcagagcaacaagctgctgcagaagcgttgaaaaag
ttaaaagaacaactataa
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