Bacillus pacificus: LMD38_08080
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Entry
LMD38_08080 CDS
T07947
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpac03016
]
LMD38_08080 (truB)
Enzymes [BR:
bpac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMD38_08080 (truB)
Transfer RNA biogenesis [BR:
bpac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMD38_08080 (truB)
Prokaryotic type
LMD38_08080 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UEP96311
LinkDB
All DBs
Position
1530782..1531705
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AA seq
307 aa
AA seq
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MEGVVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLT
SETKTYEGEVTLGFSTTTEDASGEVVETKHVDRVITRKEVEEVLAALTGTIEQMPPMFSA
VKVNGKKLYEYARAGQEVERPVRTITIHEFVLLDDREVFEGENISFRFRVTCSKGTYVRT
LAVMIGEKLGFPSHMSHLVRTASGEFVLEDCISFEEIEENVQNGTVESIFISIDEALSKF
PKMVVDEKQAEKIKNGMFLKNELQITAPFITVFDKNDRCLAIYEHHPKHPGMLKPMKVLV
NNQELKL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtagtattattacataagccaaaaggcatgacatcacacgattgtgtattt
aaattaagaaagatattgcgtgaaaaacgaattggtcatacaggaacattagatccagat
gtaacaggagtattgcctatttgtgttggacgagcaacgaagattgcacaatttttaaca
agtgaaacgaaaacatatgaaggtgaagtaacattagggttttcaacaacaactgaagat
gcttcaggtgaagttgtggaaacgaaacatgtagatcgtgttattactcgtaaagaagtg
gaagaggttcttgccgcattaacaggtacgattgagcaaatgcctccgatgttttcggct
gtaaaagttaacgggaaaaaattatatgaatatgcaagagcaggacaagaggttgaacgt
ccagttcgtacaattacaattcatgaatttgtattactagatgaccgtgaagtgtttgaa
ggagaaaatatttcattccgtttccgtgtaacgtgtagtaaaggcacatatgtaagaaca
ttagcggtaatgattggtgaaaaacttggttttccatcacatatgtctcaccttgtaaga
acggcttcaggtgaatttgtattagaagattgcatatcatttgaagaaattgaagaaaac
gtgcaaaatggaacagtagagtctatcttcatttcaattgatgaagcgttaagtaagttc
ccgaaaatggttgtagatgaaaagcaagcagaaaaaataaaaaatggtatgttcttaaaa
aatgaattgcaaataacggcgccatttataacagtgtttgataaaaacgatcgttgcctt
gcaatttatgagcaccatccaaaacaccctggtatgctaaagccgatgaaagtacttgtg
aataatcaagaactaaagctataa
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