Bacillus pacificus: LMD38_09045
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Entry
LMD38_09045 CDS
T07947
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03030
DNA replication
bpac03430
Mismatch repair
bpac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMD38_09045
03430 Mismatch repair
LMD38_09045
03440 Homologous recombination
LMD38_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpac03032
]
LMD38_09045
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_09045
Enzymes [BR:
bpac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMD38_09045
DNA replication proteins [BR:
bpac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMD38_09045
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMD38_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
MKLP1_Arf_bdg
Motif
Other DBs
NCBI-ProteinID:
UEP96490
LinkDB
All DBs
Position
1731399..1732346
Genome browser
AA seq
315 aa
AA seq
DB search
MGNISLPLDYVVIDFETTGFNPYNDKIIQVAAVKYRNHELVDQFVSYVNPERPIPDRITS
LTGITNYRVSDAPTIEEVLPLFLAFLHTNVIVAHNASFDMRFLKSNVNMLGLPEPQNKVI
DTVFLAKKYMKHAPNHKLETLKRMLGIRLSSHNAFDDCITCAAVYQKCAFIEEEAKRKSN
TEVLDETAVYEAVKEILVRNKRDIEWIRCMNVGSYLDIKAFYPVMRLKVKGRKKYVLTDI
LEDDVKEICTSLACEPALKSEVGNTRIMLNSLEDVLKLESYILEQYDFVLQALHDYKQSE
MNADEKLKEYLNIMV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggggaatatatccttaccgttagattatgttgtaattgactttgaaacaacaggattt
aatccttataatgataagatcattcaagtggcagcagtgaaatatcgtaatcatgaacta
gtagatcaatttgtttcctatgtgaatccggagcgtccaattccggaccgaataacgagt
ttaacaggtattacaaattatcgtgtttcggatgcaccgacgattgaagaagtgttacct
ttatttttagcatttttacatacaaatgtaattgtcgctcataatgcatcttttgatatg
cgctttttgaaaagtaatgtgaatatgcttggtttaccggaaccacaaaataaagtgatt
gatactgtgtttctagcaaagaaatatatgaagcacgcgcctaatcataaacttgaaacg
ttaaagcgaatgcttggaattcgtttaagttctcataatgcatttgatgattgtattact
tgtgcagcagtttatcaaaaatgtgcctttattgaagaagaggcgaaaaggaaatcgaat
acagaagtacttgatgaaacagcagtatatgaagcggtaaaagagatacttgtacgaaat
aaacgtgatattgaatggattcgttgcatgaatgtaggaagctatttagatataaaagct
ttttatccagttatgagattaaaggtaaaagggcgaaagaaatacgtattaacagacata
ttagaagatgatgtgaaagaaatatgtacgagtttagcctgtgaaccggcgttaaaaagt
gaagttggtaacacgagaattatgcttaatagcttagaggacgtcctgaaattagaaagt
tatattttagaacagtatgattttgtattgcaagcgctgcatgattataaacaaagtgaa
atgaatgcagatgaaaaactaaaagaatatttgaatattatggtgtaa
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