Bacillus pacificus: LMD38_11395
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Entry
LMD38_11395 CDS
T07947
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_11395
Enzymes [BR:
bpac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LMD38_11395
DNA repair and recombination proteins [BR:
bpac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LMD38_11395
Prokaryotic type
LMD38_11395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Adeno_52K
Motif
Other DBs
NCBI-ProteinID:
UEP96918
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All DBs
Position
2191288..2192718
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AA seq
476 aa
AA seq
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MQNKIIVMFQKDFRLYDNPALFEATQSGEVVPVYVHDETFSMGSASKWWLHHAIIDAKKQ
LEALGSTLIIRKGSTEEEILSLIEQLGITAVYWNICYDPDRLQFNQNMKMMLEDKGITCK
EFNSHLLLEPWMIKKKDNTEYKVFTPFYNAFQKQVISKPISKVQRIKWGSSLPESLSVTE
LHLLPTIPWTSHIESIWDPTEEGAYKTCKKFFSSKLASYSEGRDFPNQNAHSMLAPYLSF
GQISVRWMYHYLINKSTERQCSLFEKQVNSFIRQLIWREFSYYLLYHYPFTVYKPLNKNF
EHFPWNNEEELLTVWQKGETGYPFIDAGMRELWQTGFMHNRARMAVASFLVKHLLIPWQE
GAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKDGEYIRKWVPE
LKDMPNKYIHKPWEAPEHILQKANIKLGDTYPLPVVDHKAARERALCAYKSMKEFV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaaattattgttatgtttcaaaaagattttcgcttatatgataacccagct
ctatttgaagctactcagtccggtgaggttgttccggtatatgtacatgatgaaactttt
tcaatgggaagtgcgtcaaagtggtggttacaccatgcaataatagatgcaaagaagcaa
cttgaggcattgggctctactttaatcattcgtaaaggaagtacggaggaagaaatactt
tctctcatagaacagttaggtataacggctgtatattggaatatttgttatgatccggac
agattacaatttaatcaaaacatgaaaatgatgttagaagataaaggtattacatgtaag
gaatttaattcacatttattattagaaccgtggatgattaaaaagaaagataacactgaa
tataaggtgtttacgcctttttataatgcatttcaaaagcaggtaatatctaaacctatt
agtaaagtgcagcgtataaaatggggaagttctttaccagaaagcttatctgttacagaa
ttacacttgctgccgactataccgtggacatctcatatagaatcaatatgggatcctaca
gaagaaggggcatacaaaacatgtaagaaatttttctctagcaaattagcctcttatagt
gaaggaagagattttccaaatcaaaatgctcattcgatgttggcaccttatctttcattt
ggtcaaatatcagtgaggtggatgtatcattacttaatcaataaaagtaccgaaagacaa
tgtagtctttttgaaaaacaagtgaatagctttatccgtcaattaatttggcgagagttt
tcttattatttactatatcattacccatttacagtatataaacctcttaataagaatttt
gaacattttccgtggaataatgaagaggagttattaacagtatggcagaagggtgaaact
ggttatccgtttattgatgcgggaatgcgggaactatggcaaacaggttttatgcataat
cgagcaagaatggctgtagcctcttttcttgtaaagcatttattaattccgtggcaagaa
ggagcaaaatggtttatggatacactactagatgctgatattgcaaataataccatgggg
tggcaatgggttgctggaagtggagcggatgcatcaccgtactttcgtatttttaacccg
attacacaaggagaaaagtttgataaagatggagaatatataagaaaatgggtaccagaa
ttaaaagatatgcctaataaatatatacataaaccgtgggaagcacctgagcatatttta
caaaaggctaatataaagctaggagatacataccctttgccagttgttgatcataaggca
gcgcgggagagagcactttgtgcatataaaagtatgaaagaattcgtatga
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