Bacillus pacificus: LMD38_13235
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Entry
LMD38_13235 CDS
T07947
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpac03000
]
LMD38_13235
Transcription factors [BR:
bpac03000
]
Prokaryotic type
Helix-turn-helix
Other families
LMD38_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_2
AAA_5
AAA
AAA_3
HTH_30
AAA_22
AAA_16
Mg_chelatase
HTH_psq
Rap1_C_Sp
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UEP97252
LinkDB
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Position
2520068..2521918
Genome browser
AA seq
616 aa
AA seq
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MLASPFYLHTWKKFVDEGVLDSNRINERISESWYRCKQANVNPHMNKGQKILSSNIFQDQ
KKKSEIFLDIAIPQIQNMRKTIDELQMMALLIDPDGYVLSLSGNKQTLQRAKHINFVEGV
KWTEAAVGTNAIGTALEIEEAIMISGTEHYSVASHSWSCAAAPIHNDDGKLIGVLDFSCP
IEFSHPYMLGMVTSIAHAIERECSIRVHQNELQLIHRFLDVIDSNEQVVICNHRDVIVSA
SKRVRERVCNWSRMKLADLMHYGLKTKLEVPVYSNNRMIGKCIYVKENKQVKSFSTSPFI
NGITFPGVIGTSSAFQHTLEEIKLVSPTDASVYVCGETGVGKEYVARAIHENSPRKDGPF
IAVNCGSLPKELMESELFGYAEGAFTGARRQGYKGKFEQADGGTIFLDEIGEVPPEMQVA
LLRVLQERTVTPIGSSKEVPVNIRIITATHKDLLRLVEEGKFRQDLYYRLHVYPLYVPTL
IERKEDIPYFIKHFCEQKNWNVVFPKSICNQFYQHTWPGNIRELLNVLERIYILSQGQEI
CEKQISFLLQTMMGNQHQLALQAENKIENTLNFRERIQRDSMIEALEKTNGNVSLAAKLL
DVPRSTFYKRMQKYKL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctagcttcaccgttttacttacatacatggaaaaagtttgttgatgaaggtgtcctt
gattcgaaccgtataaacgaaagaatttcagagtcatggtatcgatgtaaacaagcaaat
gtgaatcctcatatgaataaaggtcagaaaattttgtcttctaatatttttcaagaccaa
aagaaaaagagtgaaatcttcctagatatagcaatacctcaaatacaaaatatgagaaaa
accattgatgaactgcaaatgatggcattattaatcgatccagacggttacgttctatcg
ttaagtggaaataaacaaacgttgcaacgagcgaaacatattaatttcgttgaaggtgtg
aaatggacggaagcggctgttggtacaaatgcgataggaacagcgttagaaattgaagag
gctattatgataagtggtacagagcattattctgtcgcatctcatagctggagctgtgcg
gccgctcctattcataatgatgatgggaaattaataggcgttctagatttctcttgtccg
attgagttttcgcatccatatatgctcggtatggtaacttcgattgcacatgcgattgaa
cgtgaatgtagtattcgagtacatcaaaatgaactgcagttaatccatcgttttttagat
gtaattgacagtaatgaacaagtagtaatttgtaatcatcgcgatgttatcgtttctgcg
agcaagagggttcgggaacgagtatgtaattggtcacgaatgaaacttgcagatttaatg
cactatggattgaaaactaaattagaagttccagtatacagtaataatagaatgattggg
aaatgtatctatgtaaaggaaaataaacaagtaaaatcattttcaacgtccccatttata
aatggcatcacttttcctggagtgattgggacaagtagtgcatttcaacatacattagaa
gaaattaagcttgtatcaccaactgacgcaagtgtatatgtttgtggtgaaacaggtgta
gggaaagaatatgtagcgagagcgattcatgaaaatagtccaagaaaagatggtccattt
atagctgttaactgcggttcattaccgaaagaattaatggaaagtgaattgtttggttat
gctgaaggagcgtttacaggtgcacggcgccaaggatataaagggaaattcgaacaagca
gatggaggaacaatatttttagatgaaattggtgaagtgcctccagagatgcaagtcgca
ttattgcgtgttttacaagaacgaacagtaaccccaattggcagttcaaaagaggtaccg
gtaaatattcgtattattactgcgacacataaagatttattgcgattagtagaagaaggg
aaatttcgtcaagatttatattatcggttacatgtttatccgctttatgttccaacgtta
atagaaagaaaagaggatattccatacttcataaaacatttttgtgaacaaaagaattgg
aatgttgtatttccaaaaagtatttgtaatcaattttatcagcatacatggcccggaaat
attcgagaattattaaatgtattagaacgcatttacattttatcgcaaggacaggaaata
tgcgaaaaacaaatctcttttttattacaaacaatgatgggaaatcaacatcaacttgca
ttgcaagcagaaaataaaatagagaacacattaaatttccgcgaaagaatacagcgtgac
agcatgattgaagcgctagaaaagacgaacggaaatgtttcgttagctgcaaaactttta
gatgtacctcgaagtacattttataaacgaatgcaaaaatataagctataa
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