Bacillus pacificus: LMD38_14515
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Entry
LMD38_14515 CDS
T07947
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMD38_14515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpac03019
]
LMD38_14515
03009 Ribosome biogenesis [BR:
bpac03009
]
LMD38_14515
Enzymes [BR:
bpac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMD38_14515
Messenger RNA biogenesis [BR:
bpac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMD38_14515
Ribosome biogenesis [BR:
bpac03009
]
Prokaryotic type
rRNA helicases
LMD38_14515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
UEP92603
LinkDB
All DBs
Position
complement(2764189..2765541)
Genome browser
AA seq
450 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFV
LPILEKIDPECSDVQALIVAPTRELALQITNEIKKMLVQRDDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQIQSEEVTVNTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDDLKGRGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPLQREIIEQPKIKHVDENGKPVPKPAPKKSDQYRQRDSREGSRSGSKGGRRNDSR
NSSRNDSNRSFNKPSNKKSSAKQGQQRRGR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacgtttaatcatacatta
cgtgaaaatggaattacagaagcaacaccaattcaggagaaggcaattcctgttattatg
tctggtaaggatattattgggcaggcaaaaacaggcacgggtaaaacattagcatttgtg
ttaccgattttagaaaaaatcgatccagagtgtagtgatgttcaggctttaattgttgca
ccaacaagggaactagcactgcaaattacgaatgaaattaaaaaaatgcttgttcaaaga
gatgatattaatgttctagcgatttatggtggtcaagatgtagcacagcaattgaggaaa
ttaaaaggcaatacacatattgttgttgcgacaccaggacgattattagatcatatacga
cgtgaaacaattgatttaagtaatctttcaacgattgtattagacgaagcggatcaaatg
ctttatttcggtttcttatatgatattgaagatattttagatgagacacctggtagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattggcgaaacgttat
atggatgagccgcaaatgattcaaatacaaagtgaagaagtaacggtaaatacaattgag
cagcgtgtcattgagacgacagatcgtgcaaagccggatgcacttcgttttgttatggat
cgtgatcagccatttttagcagttattttctgtcgtacaaaggttagagcaagtaagcta
tatgatgatttaaaagggagaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagctaaaattcagtacttaattgcg
actgatgtagcagctcgtggacttgatgtagatggtgtaacacacgtatttaactatgat
atccctgaagatgtagaaagctatattcaccgcattggccgaacaggacgtgcaggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccactgcaaagagaaataatcgaacaaccgaagataaaacatgtt
gatgaaaatggaaaaccggtaccaaagccggctccaaaaaaatcagatcaatatcgtcaa
agagatagccgtgaaggttcaagaagtggttctaaaggtggccgaagaaacgattcaaga
aatagttcgagaaatgatagtaaccgatcatttaataagccaagtaataagaaaagtagt
gcaaagcaaggtcagcaaagacgtggccgttaa
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